CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SYNY3 (Ribosome-recycling factor OS=Synechocystis sp. (strain PCC 6803) GN=frr PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.721e-42 Identity = 83/143 (58.04%), Postives = 109/143 (76.22%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD+I VEYYG+ LKS+A I TPD+S+++IQP+D S+ +IEKAI SDLG+TPNNDG+VIRL +P LT+ERRKEL KV K AEEGKVA+RNIRRDA+ K +K +SED +DL ++QKLTD+ K+ID + Sbjct: 29 ANASLLDRITVEYYGAETPLKSLATIGTPDASTIVIQPFDMGSIGTIEKAISLSDLGLTPNNDGKVIRLNIPPLTAERRKELVKVAGKLAEEGKVAIRNIRRDAVDEVRKQEKNSDISEDEARDLQEEIQKLTDQSTKRIDEL 171
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_THEEB (Ribosome-recycling factor OS=Thermosynechococcus elongatus (strain BP-1) GN=frr PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.165e-42 Identity = 82/143 (57.34%), Postives = 112/143 (78.32%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD++ V+YYG+ L+S+A ++TPD++++LIQPYD+S+L SIEKAI SDLG+TPNNDG +RL +P LT+ERRKEL K AK AE GKVA+RNIRRDA+ +K K +L+ED VKDL +QKLTD+Y+ KID++ Sbjct: 29 ANAALLDRVMVDYYGTETPLRSLANVSTPDATTILIQPYDRSTLASIEKAIQLSDLGLTPNNDGSSVRLNIPPLTTERRKELVKTAAKIAEGGKVAIRNIRRDAIDHIKKAGKAGELTEDEVKDLQEKVQKLTDKYIGKIDAL 171
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CYAP7 (Ribosome-recycling factor OS=Cyanothece sp. (strain PCC 7424) GN=frr PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.052e-41 Identity = 79/143 (55.24%), Postives = 110/143 (76.92%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD++ V+YYG+ LKS+A I TPD++++ IQPYD+ S+ IEKAI SD+G+TPNNDG++IRL +P LT+ERRKEL K+ K AEEGKVA+RNIRRDA+ + K +K +LSED ++L ++QK+TDEY KID + Sbjct: 29 ANSALLDRVMVDYYGTETPLKSLANITTPDATTIAIQPYDRGSMGQIEKAIQLSDIGLTPNNDGQMIRLNIPPLTTERRKELVKLAGKLAEEGKVAIRNIRRDAIDSVRKQEKNHELSEDESRNLQDEIQKVTDEYTAKIDEL 171
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_NOSP7 (Ribosome-recycling factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=frr PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.374e-41 Identity = 80/143 (55.94%), Postives = 112/143 (78.32%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LDK+ V+YYGSP LKS+A I+TPD+S++LIQPY++++L IEKAI SD+G+TP+NDG VIRL +P LTS+RRKE K+ K AEEG+VA+RNIRRDA+ + K +K ++S+D KD +LQKLT+EY +ID++ Sbjct: 29 ANASLLDKVLVDYYGSPTPLKSLANISTPDASTILIQPYERNTLNIIEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMATKYAEEGRVAIRNIRRDAIDSIRKQEKASEISKDESKDQQDNLQKLTNEYTSRIDAL 171
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_GEOSW (Ribosome-recycling factor OS=Geobacillus sp. (strain WCH70) GN=frr PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.996e-41 Identity = 79/146 (54.11%), Postives = 114/146 (78.08%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 440 +NP +L+K+ V+YYG P + +A I+ P++ L+IQPYDKS +K IEKAI+SSDLG+TP+NDG VIR+T+P LT ERR+EL K+V K +E+ KVAVRNIRRDA +KL+K +++ED ++ + D+QKLTD+++ KID+I K+ Sbjct: 32 ANPSLLEKVTVDYYGMPTPIIQLASISVPEARLLVIQPYDKSVIKDIEKAILSSDLGLTPSNDGSVIRITIPPLTEERRRELVKLVKKYSEDAKVAVRNIRRDANDELKKLEKNGEITEDELRGYTDDVQKLTDDHIAKIDAITKE 177
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACSK (Ribosome-recycling factor OS=Bacillus clausii (strain KSM-K16) GN=frr PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.219e-41 Identity = 79/146 (54.11%), Postives = 111/146 (76.03%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 440 +NP +LD++ VEYYG+ L +A + P++ LLI PYDK+++ SIEKAI+ SDLG+TP+NDG+VIR+ +P LT ERRK+L ++V+K AEE KVAVRNIRRDA +KLQK+ +++ED ++ + D+QKLTD Y+ KID KQ Sbjct: 32 ANPALLDRVTVEYYGAQTPLNQLASVTVPEARLLLITPYDKTAVASIEKAILKSDLGLTPSNDGQVIRIAIPPLTEERRKDLVRLVSKTAEESKVAVRNIRRDANDELKKLQKDGEMTEDELRSATDDIQKLTDTYVAKIDEKAKQ 177
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_TRIEI (Ribosome-recycling factor OS=Trichodesmium erythraeum (strain IMS101) GN=frr PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.903e-41 Identity = 80/143 (55.94%), Postives = 108/143 (75.52%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD++ VEYYGSP LKS+A I PD+S++ IQPYDK+SL IEKAI SD+G+TPNNDG +IRL +P LT+ERR+E+ K AK AEEGKV++RNIRRDA+ + K +K +S+D +DL +QK TD+Y+ KID + Sbjct: 29 ANASLLDRVMVEYYGSPTQLKSMANIGIPDASTITIQPYDKTSLGLIEKAINMSDVGLTPNNDGSIIRLNIPALTAERRQEMVKKTAKLAEEGKVSIRNIRRDAVDSIRKQEKNSDISKDESRDLQDKVQKKTDKYIAKIDEL 171
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACLD (Ribosome-recycling factor OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=frr PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.163e-40 Identity = 80/145 (55.17%), Postives = 109/145 (75.17%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +NP +LDK+ VEYYG+ L IA I P++ L+I PYDK++L IEKAI +DLG+TP+NDG +IR+T+P LT ERRKEL+K+V K +E+ KVAVRNIRRDA +KL+K +++ED ++ + D+QKLTDEY+ KID I K Sbjct: 32 ANPSLLDKVAVEYYGAQTPLNQIASITVPEARMLVITPYDKTALGDIEKAIQKADLGVTPSNDGNIIRITIPPLTEERRKELAKLVKKYSEDAKVAVRNIRRDANDDLKKLEKNGEMTEDELRSSTEDVQKLTDEYVSKIDEITK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SYNP2 (Ribosome-recycling factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=frr PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.519e-40 Identity = 80/141 (56.74%), Postives = 104/141 (73.76%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +LD+I VEYYG+ LKS+A I+TPDSS+++IQP+D+ SL +E+AI SDLG+TPNNDG IRL +P LT ERR+EL K K AEEGKVA+RNIRRDA+ K +K +SED + L D+QK+TDE+ KID + K Sbjct: 33 LLDRITVEYYGAETPLKSLASISTPDSSTIMIQPFDRGSLSDVERAISMSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGKVALRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKVTDEFTTKIDDLLK 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACHD (Ribosome-recycling factor OS=Bacillus halodurans GN=frr PE=3 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.519e-40 Identity = 79/141 (56.03%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 425 +NP MLD+I VEYYG+ L +A I+ P++ L+IQP+DKSS+ IE+AI SDLG+TP+NDG VIR+T+P LT ERR++L+K+V K AEE KVAVRNIRRDA +K QK+ +L+ED+++ ++ D+QKLTD+Y+++ID Sbjct: 32 ANPAMLDRITVEYYGAETPLNQLATISVPEARLLVIQPFDKSSISDIERAIQKSDLGLTPSNDGTVIRITIPPLTEERRRDLTKLVKKSAEEAKVAVRNIRRDANDDLKKRQKDGELTEDDLRRVTEDVQKLTDKYIEQID 172 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |