CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_LACDA (Ribosome-recycling factor OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=frr PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.681e-37 Identity = 75/143 (52.45%), Postives = 106/143 (74.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD++ VEYYG P L +A I P+ L+I PYDK+SL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+AVRN+R++A+KA +K +K+ +++ED + L ++QK+TDE KKID + Sbjct: 32 ANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITPYDKTSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAVRNVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_DESVM (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=frr PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.681e-37 Identity = 71/137 (51.82%), Postives = 105/137 (76.64%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 425 ++D I+V+YYG+P + +A ++ PDS +L IQP+D+S+ + +EKAI+ SDLG+ P NDG++IR+++P LT ERRK+L KV K EE KVAVRN+RRDA A +KL+K K++SED+V+ + D+QKLTD ++ K D Sbjct: 37 LVDNIKVDYYGTPTPISQLASVSVPDSRTLTIQPWDRSAFQLVEKAIMKSDLGLNPVNDGKIIRISIPPLTEERRKDLVKVARKYTEEAKVAVRNVRRDANDALKKLEKGKEISEDDVRKSTDDVQKLTDRFVAKSD 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOBL (Ribosome-recycling factor OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=frr PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.681e-37 Identity = 77/143 (53.85%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP MLD+IE EYYGS L + I+ P++ LLIQP+DKS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KVA+R+IRRD + L+K+ +SED++K D+QK TD+Y+K+IDSI Sbjct: 32 ANPAMLDRIEAEYYGSMTPLNQLGNISIPEARVLLIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSI 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRTD (Ribosome-recycling factor OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD+I VEYYG+P L +A I P++ LLI P+DK S+ IE+AI SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +KEK+++ED +K L D+QK TD+ + KIDS+ Sbjct: 32 ANASLLDRITVEYYGAPTPLNQLASITVPEARVLLISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRT2 (Ribosome-recycling factor OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD+I VEYYG+P L +A I P++ LLI P+DK S+ IE+AI SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +KEK+++ED +K L D+QK TD+ + KIDS+ Sbjct: 32 ANASLLDRITVEYYGAPTPLNQLASITVPEARVLLISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRT1 (Ribosome-recycling factor OS=Streptococcus thermophilus (strain CNRZ 1066) GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD+I VEYYG+P L +A I P++ LLI P+DK S+ IE+AI SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+A+RNIRRDA+ +K +KEK+++ED +K L D+QK TD+ + KIDS+ Sbjct: 32 ANASLLDRITVEYYGAPTPLNQLASITVPEARVLLISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOBM (Ribosome-recycling factor OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 77/143 (53.85%), Postives = 105/143 (73.43%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP MLD+I+ EYYGS L +A I+ P++ LLIQP+DKSS+ +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KVA+R+IRRD + L+K+ +SED++K D+QK TD+Y+K+IDSI Sbjct: 32 ANPAMLDRIDAEYYGSMTPLNQLANISVPEARVLLIQPWDKSSMGAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEETKVAIRSIRRDCNDDVKNLKKD-DVSEDDIKKTEDDIQKKTDKYIKEIDSI 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CALS8 (Ribosome-recycling factor OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 71/143 (49.65%), Postives = 106/143 (74.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP +LDK+ V+YYG P + +A I P++ ++IQP++ LK IEKAI +DLG+ P NDG+VIRL P+LT ERRKEL K V K AE+ KVA+RNIRR+A+ Y+K++K +++ED++KD D+QKL D+Y+++I+ + Sbjct: 31 ANPHILDKVMVDYYGVPTPIPQLASITVPEARMIVIQPWEARMLKEIEKAIQKADLGVNPANDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAIRNIRREAIDEYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKL 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACCN (Ribosome-recycling factor OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 71/141 (50.35%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR+EL KVV K AE+ KVA+RN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 36 ILDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKYAEDAKVAIRNVRRDGNDELKKLEKAGEMTEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SYNSC (Ribosome-recycling factor OS=Synechococcus sp. (strain CC9605) GN=frr PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 73/141 (51.77%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 425 +N +LD+I VEYYG+ LKS+A ++TPDS ++ IQP+D S+L SIEKAI S+LG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKVA+RN+RRDA+ +K +KE + SED +D +QK D+++ +++ Sbjct: 29 ANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQIQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKVALRNLRRDAIDKIKKQEKEGEFSEDQSRDEQDGVQKTLDKFIAELE 169 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |