CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_VIBHA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi GN=metE PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 110/194 (56.70%), Postives = 137/194 (70.62%), Query Frame = -2
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            +F R D  R     Q+ALA++DEV DL++AGIN+IQIDE A+REGLPL+K +H  YL WAV +F+I     +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP IPS E I + I K    +    LWVNPDCGLKTR ++E + AL+N+V+AAK LR +L
Sbjct:  567 TFPREDITRKAIADQLALALRDEVSDLQQAGINIIQIDEPAIREGLPLKKRDHKAYLQWAVDAFKIAAASAKPETQIHTHMCYSEFNEIIDSVAALDADVITIETSRSNMELLKAF-EDFNYPNEIGPGVYDIHSPNIPSEEWIEELIKKAAEKIPAQRLWVNPDCGLKTRNWSETEAALANLVSAAKKLRAEL 759          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SHEON (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shewanella oneidensis GN=metE PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.017e-56
Identity = 114/194 (58.76%), Postives = 135/194 (69.59%), Query Frame = -2
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            SF R D  R     Q+ALAI+DEV DL+ AGI +IQIDE A REGLPL++SE   YLDWAV++F+++  GV D TQIHTHMCYS FND I +I  MDADVITIE SRS  +LL+ F E  +Y   IGPGVYDIHSP  PS E +   I K    +    LWVNPDCGLKTR + EV+PAL NMV A + LR +L
Sbjct:  567 SFAREDISRDTIATQLALAIRDEVVDLQHAGIGIIQIDEPAFREGLPLKQSEWQAYLDWAVNAFKLSAAGVVDETQIHTHMCYSEFNDTIAAIAAMDADVITIETSRSRMELLNAF-EDFEYPNEIGPGVYDIHSPNTPSVEAMVHLIEKAAQKVPVRQLWVNPDCGLKTRTWDEVEPALKNMVDATRELRRRL 759          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei GN=metE PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.017e-56
Identity = 115/194 (59.28%), Postives = 137/194 (70.62%), Query Frame = -2
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            SFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R ++
Sbjct:  566 SFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKV 758          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BUCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=metE PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.047e-55
Identity = 113/194 (58.25%), Postives = 139/194 (71.65%), Query Frame = -2
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            SFVR D  +     QIALA++DEV DLE++G+ +IQIDE ALREGLPLR S    YL WAV SF++++ GV D TQIHTHMCY  FNDI+++I+ +DADVITIE SRSD +LL  F+E  KY   IGPGVYDIHSP IPS E I   + + +  +    LWVNPDCGLKTR + E   +L NMV AAK+LR +L
Sbjct:  564 SFVREDLSKKIISRQIALALRDEVLDLEQSGVKIIQIDEPALREGLPLRLSLRNEYLSWAVDSFKLSSSGVCDETQIHTHMCYCEFNDIMNAIVLLDADVITIETSRSDMELLEFFKE-FKYPNDIGPGVYDIHSPNIPSIEWIMTLLRQAMHYIPVKRLWVNPDCGLKTRTWDETYYSLENMVRAAKILRKKL 756          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.368e-55
Identity = 111/191 (58.12%), Postives = 134/191 (70.16%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SF R D  R     QIALA++DEV+DL+KAGI +IQIDE ALREGLPLR+ E   YLDWAV +F+++     D TQIHTHMCY  FNDI+ +I  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +P+ E I   + K  + +    LWVNPDCGLKTR ++E + AL+NMV AAK LR
Sbjct:  565 SFPREDVSRETIAKQIALALRDEVDDLQKAGIGIIQIDEPALREGLPLRRDEWQAYLDWAVDAFKLSAAIADDETQIHTHMCYCEFNDIMEAIAALDADVITIETSRSDMELLEAF-EHFDYPNEIGPGVYDIHSPNVPNVEWIVGLLRKAQSRIPAERLWVNPDCGLKTRGWSETRAALANMVEAAKYLR 754          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BIFAA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=metE PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.368e-55
Identity = 113/196 (57.65%), Postives = 139/196 (70.92%), Query Frame = -2
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            S+ R D    +   Q+ALAI+DEV DLEKAGI VIQIDEAALRE LPLRK++ H  YLDWA+ +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +   +    GPGVYDIHSPRIPS +EI DRI ++L  ++   +W+NPDCGLKTR   E  P+L N+VAAAK +R +LA
Sbjct:  573 SWPREDITHEQQTQQLALAIRDEVLDLEKAGIKVIQIDEAALREKLPLRKTDWHKKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFNDIIKDIDAMDADVISFEASRGDLVVLDAIHDA-NFETEAGPGVYDIHSPRIPSEQEIEDRIYEILKKMDVEKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKLA 767          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_THEYD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=metE PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.786e-55
Identity = 105/191 (54.97%), Postives = 139/191 (72.77%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            S+ R D  R E  YQIALA+K+EV +LEK GI +IQIDE A REGLPL++++   Y DW ++SFR+T   V   TQIHTHMCYS+FN+II  I  +DADVI+IE SRS  ++LS F E  +Y  GIG GVYDIHSPR+PS EE+ + I + +++++ ++ W+NPDCGLKTR + E   +L NMV AAK +R
Sbjct:  552 SYPRKDISRREIAYQIALALKEEVLELEKRGIKIIQIDEPAFREGLPLKRNKQDEYFDWTINSFRLTTADVSPFTQIHTHMCYSDFNEIIDRIYALDADVISIEASRSKGEILSAF-ENFRYDHGIGLGVYDIHSPRVPSVEEMIEIIERSVSLIDKSLFWINPDCGLKTRGWQETVASLKNMVLAAKAMR 741          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BAUCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metE PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.786e-55
Identity = 114/193 (59.07%), Postives = 134/193 (69.43%), Query Frame = -2
Query:  209 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 787
            SF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPL+ S    YL WAV +FR+     ++ TQIHTHMCYS FNDI+ SII MDADVITIE SRS+ KLL  F++  +Y   IGPGVYDIHSP IPS ++I   + K   V+    LWVNPDCGLKTR + E + ALSNMV AA  LR +
Sbjct:  567 SFPREDLDRKTIARQIALALRDEVIDLENAGIGIIQIDEPALREGLPLKYSAWKEYLTWAVEAFRLNAAVAKNNTQIHTHMCYSEFNDIMDSIIAMDADVITIETSRSNMKLLDTFKQ-YQYPNDIGPGVYDIHSPNIPSEDDIIQLLRKAAQVIPIKRLWVNPDCGLKTRTWLETRKALSNMVNAAHKLRRE 758          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PHOPR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photobacterium profundum GN=metE PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.333e-55
Identity = 109/193 (56.48%), Postives = 134/193 (69.43%), Query Frame = -2
Query:  209 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 787
            +F R D PR     QIALA++DEV DL+ AGI +IQIDE A+REGLPL++S+   YLDWAV++F+I+    +  TQIHTHMCYS FN II S+  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP IPS E+I   + K   ++    LW+NPDCGLKTR + E + AL +MV A K LR Q
Sbjct:  569 TFPREDLPRQGIANQIALALRDEVSDLQAAGIKIIQIDEPAIREGLPLKESQWQAYLDWAVNAFKISAASAEPQTQIHTHMCYSEFNHIIKSVAALDADVITIETSRSDMELLKAFEE-FDYPNEIGPGVYDIHSPNIPSIEQIVHLVEKAETLIPIERLWINPDCGLKTRNWEETEAALRSMVEATKKLREQ 760          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.333e-55
Identity = 112/191 (58.64%), Postives = 133/191 (69.63%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SF R D  R     QIALA++DEV+DL++AGI +IQIDE ALREGLPLR+ E   YLDWAV +F++     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR +TE + +L+NMV AAK LR
Sbjct:  565 SFPREDVSRETIAKQIALALRDEVDDLQEAGIGIIQIDEPALREGLPLRREEWQSYLDWAVEAFKLNAAIAKDDTQIHTHMCYCEFNDIMPSIAALDADVITIETSRSDMELLDSF-ENFSYPNEIGPGVYDIHSPNVPSVEWIEALLRKAADRIPVERLWVNPDCGLKTRGWTETRQSLANMVQAAKRLR 754          
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_VIBHA6.139e-5656.705-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHEON8.017e-5658.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPS8.017e-5659.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCBP1.047e-5558.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH1.368e-5558.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFAA1.368e-5557.655-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEYD1.786e-5554.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BAUCH1.786e-5559.075-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOPR2.333e-5556.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOLL2.333e-5558.645-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
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