CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SOLUE (Xylose isomerase OS=Solibacter usitatus (strain Ellin6076) GN=xylA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27 Identity = 64/138 (46.38%), Postives = 86/138 (62.32%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G+ID N GDPQ GWDTDQF D+ E T + ++ GG GG NFDAK+RR+S + DLF AH+ +DTVA+GL AA +IE G L +V++RY + E+G+ I GK E L A+ G P+ S +QE+ E Sbjct: 294 GSIDMNRGDPQNGWDTDQFPNDVREITTALYYILLGGGFTTGGNNFDAKVRRQSFEPADLFYAHVGAVDTVAQGLINAAAMIEGGQLAGIVKERYAGWQGELGRAILDGKMSLEALSDGAVAEGITPRPRSGRQEMIE 431
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_MARMS (Xylose isomerase OS=Marinomonas sp. (strain MWYL1) GN=xylA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27 Identity = 63/138 (45.65%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF T + E TL+ ++K+GG GG+ FD KLRR+S D+EDLF HI MDT+A L A K+IED L +V +RY ++ +G I AGK + L + A + +P+ S +QE+ E Sbjct: 293 GSVDANQGDAQLGWDTDQFPTSVEEYTLVTYEILKSGGFKTGGYMFDTKLRRQSMDLEDLFHGHIGAMDTLALSLERAVKMIEDEKLANIVDQRYAKWNDSLGADILAGKHTLQDLAEYAEKNNIDPQPVSGRQEMLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_FERGO (Xylose isomerase OS=Fervidobacterium gondwanense GN=xylA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.308e-27 Identity = 67/144 (46.53%), Postives = 87/144 (60.42%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GD +GWDTDQF TD+ E T M V++N GL GFNFDAK+RR S D ED+ AH+ MD A GL+ A KL E + ++ +RY ++SEIG KI GK + L + + +V S KQEL EM+ I Sbjct: 289 GSIDANRGDLLLGWDTDQFPTDVYETTFAMYEVLENNGL-DCGFNFDAKVRRASIDPEDIVYAHVSSMDAFALGLKLAVKLRE--KVKPMIEERYSEYNSEIGMKILEGKTTLDELSSYVEDLTDVRVKSLKQELLEMVINDVI 429
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURCH (Xylose isomerase OS=Burkholderia cenocepacia (strain HI2424) GN=xylA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27 Identity = 65/145 (44.83%), Postives = 85/145 (58.62%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++++GG GG NFDAK+RR+S D EDLF H+ +D +A L AA L+E+ L L R+RY +D G+KI +G E L A+ G P+ S QE E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSIDPEDLFYGHVGAIDVLALALERAAVLVENDRLDALRRQRYAQWDDAFGRKILSGGYTLESLAADALARGVNPRHASGAQERLENIVNQAI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURCC (Xylose isomerase OS=Burkholderia cenocepacia (strain MC0-3) GN=xylA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27 Identity = 65/145 (44.83%), Postives = 85/145 (58.62%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++++GG GG NFDAK+RR+S D EDLF H+ +D +A L AA L+E+ L L R+RY +D G+KI +G E L A+ G P+ S QE E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSIDPEDLFYGHVGAIDVLALALERAAVLVENDRLDALRRQRYAQWDDAFGRKILSGGYTLESLAADALARGVNPRHASGAQERLENIVNQAI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURCA (Xylose isomerase OS=Burkholderia cenocepacia (strain AU 1054) GN=xylA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27 Identity = 65/145 (44.83%), Postives = 85/145 (58.62%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++++GG GG NFDAK+RR+S D EDLF H+ +D +A L AA L+E+ L L R+RY +D G+KI +G E L A+ G P+ S QE E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSIDPEDLFYGHVGAIDVLALALERAAVLVENDRLDALRRQRYAQWDDAFGRKILSGGYTLESLAADALARGVNPRHASGAQERLENIVNQAI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_LACBA (Xylose isomerase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=xylA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = -3 Query: 339 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAP-GGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAME 704 G++DAN GD +GWD D++ +++ E T M V++NG + P GG NFDAK RR S EDLF+ HIVGMD+ A GLR AA + +DG L L RY S+ S +G IE+GKAD + LE A++ Sbjct: 295 GSLDANQGDKLIGWDIDEYPSNLYETTAAMYEVVENGSIGPRGGLNFDAKPRRSSFAPEDLFLGHIVGMDSFAAGLRVAAAMKQDGFLDSLKADRYSSYKSGVGADIESGKADLKSLEAYAID 417
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BURM1 (Xylose isomerase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=xylA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27 Identity = 64/145 (44.14%), Postives = 85/145 (58.62%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G++DAN GDPQ GWDTDQF + E TL ++++GG GG NFDAK+RR+S D EDLF H+ +D +A L AA L+E+ L + R+RY +D G+KI +G E L A+ G P+ S QE E I AI Sbjct: 292 GSVDANRGDPQNGWDTDQFPNSVEELTLAFYEILRHGGFTTGGMNFDAKVRRQSVDPEDLFYGHVGAIDVLALALERAAVLVENDRLEAMRRQRYAQWDDAFGRKILSGGYTLESLAADALARGVNPQHASGAQERLENIVNQAI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_LACBR (Xylose isomerase OS=Lactobacillus brevis GN=xylA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.970e-27 Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = -3 Query: 339 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAP-GGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAME 704 G++DAN GD +GWD D++ +++ E T M V++NG + P GG NFDAK RR + EDLF+ HIVGMD+ A GLR AA + +DG L L RY S+ S +G IE+GKAD + LE A++ Sbjct: 295 GSLDANQGDKLIGWDIDEYPSNLYETTAAMYEVVENGSIGPRGGLNFDAKPRRSAFAPEDLFLGHIVGMDSFAAGLRVAAAMKQDGFLDNLKADRYSSYKSGVGADIESGKADLKSLEAYAID 417
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SILST (Xylose isomerase OS=Silicibacter sp. (strain TM1040) GN=xylA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.491e-27 Identity = 64/138 (46.38%), Postives = 83/138 (60.14%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKA-MEWGEPKVPSAKQELAE 704 G+ID N D Q GWDTDQF + E L ++K+GG GG NFDAKLRR+S D EDL +AHI GMD ARG + AA +IEDG+L + V RY + ++ Q + AGK + + K+ E PK S +QE E Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNTPEVALAYYHILKHGGFTTGGTNFDAKLRRQSIDAEDLLMAHIGGMDICARGFKAAAAMIEDGTLDQFVTDRYAGWQTDPAQDMLAGKLSLDEIAKRVEAEDINPKPRSGRQEYLE 429 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |