CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BRUSU (Xylose isomerase OS=Brucella suis GN=xylA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ AA+++EDG+L + + +RY ++ E G+++ +G + ++ + + P+ S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDSQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPKSGRQEYLENI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BRUSI (Xylose isomerase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=xylA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ AA+++EDG+L + + +RY ++ E G+++ +G + ++ + + P+ S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEKALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPKSGRQEYLENI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BRUME (Xylose isomerase OS=Brucella melitensis GN=xylA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ AA+++EDG+L + + +RY ++ E G+++ +G + ++ + + P+ S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPKSGRQEYLENI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BRUMB (Xylose isomerase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=xylA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ AA+++EDG+L + + +RY ++ E G+++ +G + ++ + + P+ S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPKSGRQEYLENI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BRUC2 (Xylose isomerase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=xylA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ AA+++EDG+L + + +RY ++ E G+++ +G + ++ + + P+ S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPKSGRQEYLENI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BRUAB (Xylose isomerase OS=Brucella abortus GN=xylA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ AA+++EDG+L + + +RY ++ E G+++ +G + ++ + + P+ S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPKSGRQEYLENI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BRUA2 (Xylose isomerase OS=Brucella abortus (strain 2308) GN=xylA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ AA+++EDG+L + + +RY ++ E G+++ +G + ++ + + P+ S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPKSGRQEYLENI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BRUA1 (Xylose isomerase OS=Brucella abortus (strain S19) GN=xylA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D +DL I HI GMD ARGL+ AA+++EDG+L + + +RY ++ E G+++ +G + ++ + + P+ S +QE E I Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLDERYAGWNGEFGKRLLSGLSLDQIAGEVEAKDINPQPKSGRQEYLENI 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BIFLD (Xylose isomerase OS=Bifidobacterium longum (strain DJO10A) GN=xylA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 57/123 (46.34%), Postives = 79/123 (64.23%), Query Frame = -3 Query: 339 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAP-GGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAME 704 G++DAN GD +GWD D+F TD+ E +M V++ G + P GG NFDAK RR S EDLF +HI GMDT A GL A K+ +DG + +L+ +RY S+DS IG+ I+ G LE +++ Sbjct: 293 GSLDANQGDKLIGWDMDEFPTDLYETVAVMWEVLQAGSIGPHGGLNFDAKPRRTSFYEEDLFRSHIAGMDTYAAGLLVADKMNQDGFIQDLMAERYSSYDSGIGKDIDEGNVTLADLEAYSLD 415
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHIE6 (Xylose isomerase OS=Rhizobium etli (strain CIAT 652) GN=xylA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24 Identity = 64/144 (44.44%), Postives = 82/144 (56.94%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGE-----PKVPSAKQELAEMI 704 G+ID N D Q GWDTDQF ++ E L V+ GG GG NFDAKLRR+S D DL I HI GMD ARGL+ AAK+IED +L + + RY ++S QK+ G+ + + W E P+ S KQEL E + Sbjct: 292 GSIDMNRNDYQSGWDTDQFPNNVPEMALAYYHVLAGGGFKTGGTNFDAKLRRQSLDPADLLIGHIGGMDCCARGLKAAAKMIEDKALSQPLADRYAGWESAEAQKLFRGEYSLD----EITNWVESHDVNPQPKSGKQELLENV 431 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |