CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACME (Xylose isomerase OS=Bacillus megaterium GN=xylA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.673e-31 Identity = 67/144 (46.53%), Postives = 90/144 (62.50%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G++DAN GDP +GWDTD+F TD+ TL M +++NGGL GG NFDAK+RR S + +DL AH+ GMD ARGL+ A KL+ED ++ +RY SF IG +I GKA+F LE+ A + S +QE + I I Sbjct: 299 GSVDANQGDPLLGWDTDEFPTDLYSTTLAMYEILQNGGLGSGGLNFDAKVRRGSFEQDDLLYAHVAGMDAFARGLKVAHKLVEDRVFENVINERYSSFKEGIGLEIVEGKANFHTLEQYAFKNPNIANKSGRQERLKSILNQYI 442
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_PEDPA (Xylose isomerase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=xylA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.409e-31 Identity = 66/117 (56.41%), Postives = 80/117 (68.38%), Query Frame = -3 Query: 354 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLE 704 G++DAN GD +GWD D+F DI EATL+M ++KNGGLA GG NFDAK RR+S +EDLF+AH GMDT A GLR AAKL+ED ++ RY SF S IG E K F+ LE Sbjct: 294 GSLDANMGDKLIGWDIDEFPNDIYEATLVMYEMLKNGGLATGGLNFDAKPRRQSFTMEDLFLAHTAGMDTYAAGLRVAAKLLEDRVFDSVIEDRYSSFKSGIGADFENDKVTFKELE 410
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_HAEI8 (Xylose isomerase OS=Haemophilus influenzae (strain 86-028NP) GN=xylA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.409e-31 Identity = 67/145 (46.21%), Postives = 93/145 (64.14%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G+IDAN GDPQ+GWDTDQF + E TL+M ++K+GG GGFNFDAK+RR+S D DLF AHI +D +A L+ AAK++++ +L ++V RY ++SE+GQ I GK E L + + PK S +QE E + I Sbjct: 293 GSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKHGGFTTGGFNFDAKIRRQSIDPYDLFYAHIGAIDVLALSLKRAAKMLQEKTLQKIVNARYAGWNSELGQHILQGKTSLETLAQLVQQKDLAPKPVSGQQEYLENLVNQVI 437
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACC1 (Xylose isomerase OS=Bacillus cereus (strain ATCC 10987) GN=xylA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.409e-31 Identity = 68/144 (47.22%), Postives = 92/144 (63.89%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G++DAN G+P +GWDTD+F T++ TL M +++NGGL GG NFDAK+RR S + EDL AHI GMD ARGL+ A KL+ED ++ +RY SF IG +I G+A+F LE+ A++ K S KQE + I I Sbjct: 299 GSVDANQGNPLLGWDTDEFPTNLYSTTLAMYEILQNGGLGSGGLNFDAKVRRASFEEEDLVYAHIAGMDAFARGLKVAHKLLEDRVFENIIDERYHSFRDGIGLEIVEGRANFHTLEQYALQNSIIKNQSGKQERLKAILNQYI 442
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_LISW6 (Xylose isomerase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=xylA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 64/121 (52.89%), Postives = 87/121 (71.90%), Query Frame = -3 Query: 342 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAM 704 G+IDAN GD +GWDTD+F T+I + TL M +++NGG+APGG NFDAK+RR S ++EDL +AHI GMDT ARGL+ AAKL ED ++ +RY+SF IG +I + DF+ L + A+ Sbjct: 291 GSIDANQGDLLLGWDTDEFPTNIYDTTLTMYEILQNGGIAPGGINFDAKVRRTSFEMEDLLLAHIAGMDTYARGLKAAAKLTEDHFFDKIKEERYRSFKKGIGARILDNQEDFKSLTEYAL 411
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACP2 (Xylose isomerase OS=Bacillus pumilus (strain SAFR-032) GN=xylA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 63/134 (47.01%), Postives = 92/134 (68.66%), Query Frame = -3 Query: 303 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQE 704 G++DAN G+ +GWDTD+F TD+ TL M +++NGGL GG NFDAK+RR S ++ED+ AHI GMD A+GLR A +LIED ++++ RY+SF IG+ I GKA+F +LE+ A++ + S ++E Sbjct: 299 GSVDANQGNTLLGWDTDEFPTDLYATTLAMYEILQNGGLGTGGLNFDAKVRRASFELEDILYAHIAGMDAFAKGLRVAHRLIEDRVFEDVIKHRYRSFSEGIGRDISEGKANFHILEEYALKHPLIRNESGREE 432
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_TETHA (Xylose isomerase OS=Tetragenococcus halophilus GN=xylA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = -3 Query: 342 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAM 704 G++DAN GD +GWDTD+F TDI ATL M V+ GG+APGG NFDAK+RR S ++DL +AHI GMDT ARGLR AAK+ +D +++ RY+SF S IG++I K D E L A+ Sbjct: 291 GSLDANQGDLLLGWDTDEFPTDIYTATLAMYEVLDFGGIAPGGLNFDAKVRRTSFAMDDLILAHIAGMDTYARGLRAAAKMKDDNFFEQIIANRYESFSSGIGKQIVENKEDLESLTNYAL 411
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_RHOBA (Xylose isomerase OS=Rhodopirellula baltica GN=xylA PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 72/145 (49.66%), Postives = 92/145 (63.45%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKV-PSAKQELAEMIFQSAI 704 G+IDANTGD +GWDTDQF TD T ML ++K+GG+ GG NFDAK+RRES + DLF AHI GMD A+GL+ AA + G L + V+ RY ++DS IG KIEAG+ F LE +E G+ S +QE E + I Sbjct: 292 GSIDANTGDLLLGWDTDQFPTDYYLTTQTMLMILKHGGIGTGGVNFDAKVRRESFEPIDLFHAHIGGMDAFAKGLKIAAAIRASGELADFVKNRYSTWDSGIGAKIEAGEVGFAELEAYMLEKGDVDANQSGRQEYLEHMINKYI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA1_XANCP (Xylose isomerase 1 OS=Xanthomonas campestris pv. campestris GN=xylA1 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 71/137 (51.82%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAE 704 G+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ L +RY SFDS G G + L K A GEP S +QE E Sbjct: 301 GSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVADALLTSSPLETWRAQRYASFDSGAGADFANGTSTLADLAKYAAGRGEPTQVSGRQEAYE 437
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA1_XANC8 (Xylose isomerase 1 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=xylA1 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 71/137 (51.82%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAE 704 G+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ L +RY SFDS G G + L K A GEP S +QE E Sbjct: 301 GSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVADALLTSSPLETWRAQRYASFDSGAGADFANGTSTLADLAKYAAGRGEPTQVSGRQEAYE 437 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |