CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_PHOPR (Xylose isomerase OS=Photobacterium profundum GN=xylA PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 67/145 (46.21%), Postives = 90/145 (62.07%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQSAI 704 G+IDAN GDPQ+GWDTDQF + E TL+M ++K GG GGFNFD+ +RR S D EDLF HI GMDT+A L AA +IE+ L + + +RY ++ ++G+KI +G E L K A++ P S +QE E I I Sbjct: 293 GSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTGGFNFDSHVRRPSIDAEDLFYGHIGGMDTMALALERAANMIENDVLSKNIAQRYAGWNEDLGKKILSGDHSLETLAKFALDSNIAPVKESGRQEHLENIVNGFI 437
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_XANOM (Xylose isomerase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=xylA1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 70/137 (51.09%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAE 704 G+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ L + +RY SFD+ G AGK L A PK S +QE E Sbjct: 301 GSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTSSPLEQWRAERYASFDNGTGADFAAGKITLADLAAHA-AGNAPKQISGRQEAYE 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SHIBS (Xylose isomerase OS=Shigella boydii serotype 4 (strain Sb227) GN=xylA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = -3 Query: 339 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAME 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA++IEDG L + + +RY ++SE+GQ+I G+ L K A E Sbjct: 293 GSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQE 414
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALG2 (Xylose isomerase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=xylA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++SE+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNSELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALEP (Xylose isomerase OS=Salmonella enteritidis PT4 (strain P125109) GN=xylA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++SE+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNSELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_SALDC (Xylose isomerase OS=Salmonella dublin (strain CT_02021853) GN=xylA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG L + V KRY ++SE+GQ+I G+ L + A + P S QEL E Sbjct: 293 GSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNSELGQQILKGQLSLGELAQYAEQHNLAPVHQSGHQELLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ECO5E (Xylose isomerase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=xylA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 66/138 (47.83%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA +IEDG L + + +RY ++SE+GQ+I G+ L K A E P S +QE E Sbjct: 293 GSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAACMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ECO57 (Xylose isomerase OS=Escherichia coli O157:H7 GN=xylA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 66/138 (47.83%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAE 704 G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA +IEDG L + + +RY ++SE+GQ+I G+ L K A E P S +QE E Sbjct: 293 GSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAACMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLE 430
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA2_XANOR (Xylose isomerase 2 OS=Xanthomonas oryzae pv. oryzae GN=xylA2 PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 70/137 (51.09%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAE 704 G+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ L + +RY SFD+ G AGK L A PK S +QE E Sbjct: 301 GSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTSSPLEQWRAERYASFDNGTGADFAAGKITLADLAAHA-AGNAPKQISGRQEAYE 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA1_XANOR (Xylose isomerase 1 OS=Xanthomonas oryzae pv. oryzae GN=xylA1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 70/137 (51.09%), Postives = 85/137 (62.04%), Query Frame = -3 Query: 294 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAE 704 G+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ L + +RY SFD+ G AGK L A PK S +QE E Sbjct: 301 GSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTSSPLEQWRAERYASFDNGTGADFAAGKITLADLAAHA-AGNAPKQISGRQEAYE 436 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |