CF834600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_THEAC (50S ribosomal protein L22P OS=Thermoplasma acidophilum GN=rpl22p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15 Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = -2 Query: 297 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 752 M YS E + KAR + + K++ AH +R +PL++AK ++ V+ AIP+ R+ V +R G GR+PVK+AK LL+N E+NAE KGL+ D L I HI N+ + ++ T +A+GR ++E+ ++ Sbjct: 4 MKGYSMEIEG--NHAKARIREADISLKDSVNIAHHLRGMPLSRAKEIIDAVINKTYAIPYFRYLDSVS------HRPGVGPGRYPVKAAKAFKQLLENVENNAEFKGLNTDNLVIKHIAANKGRMIKKYTPKAYGRAGANFKDLINLEIIVT 147
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_PYRFU (50S ribosomal protein L22P OS=Pyrococcus furiosus GN=rpl22p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15 Identity = 54/148 (36.49%), Postives = 75/148 (50.68%), Query Frame = -2 Query: 300 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 743 YS + +P + +A DLR+ K E +R + L A RYL+DV+A K+ +P R+ G K G GR+PVK AK I +L N ++NA KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 7 YSFQNFDPKRMARASARDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALKRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNVKNNAVQKGLDPDKLKIIHIAAHKGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_HALWD (50S ribosomal protein L22P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15 Identity = 44/150 (29.33%), Postives = 84/150 (56.00%), Query Frame = -2 Query: 300 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 749 + YS + D P + + D + K+++ A I+ + + A+ YL+DV+A +Q++PF + GVG + GR+P K++K L+L++N SNA +G D +A+ I H+ ++ +++ R RA G +P+ ++ C +EL + Sbjct: 3 INYSVKAD-PETTARGMLRDRPISLKHSKAIAREIKGMTIADAESYLDDVIAQRQSVPFRQHNSGVGHRSDIDGWDA---GRYPEKASKAFLELIENVASNANEQGFDGNAMAIRHVAAHKVGERQGRKPRAFGSADPWNTTICDVELII 148
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_SULAC (50S ribosomal protein L22P OS=Sulfolobus acidocaldarius GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.717e-15 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = -2 Query: 300 KSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 716 K KA ++ ++ AIR + L +A+ +L +V+ K+A+PF R+ G + + GR+P K+ K++L LL NAE+NA KGLD+D L I HI ++ +R RA GR HIE+ L Sbjct: 15 KLAKAVIKNIDASVRDLYNVCKAIRGMNLKEAREFLNNVLEEKEALPFWRYSHGTSHRSNISRKWKVKSGRYPKKAIKYVLKLLDNAENNANSKGLDIDNLKIVHIAAHKGLVLKRYMTRAFGRSTRKYKYLSHIEVIL 153
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_METMJ (50S ribosomal protein L22P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15 Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 297 KARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 707 +A+ ++L V K++ E A I+ + T+AK YL DV+A K+AIPF RF V + ++ P GR+PVK+A+ + LL++ E NAE GLDV+ L I H N + R RA GR P +IE+ ++ Sbjct: 17 RAKANELPVSPKHSIEIARFIKNMTTTEAKAYLTDVVALKKAIPFKRFNRNVAHK-RGLSKWP--AGRYPVKAAEAYIRLLESVEKNAEYIGLDVENLRIDHAAANTGRGLRAFFPRAMGRATPKRRETVNIEIVVT 150
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_HALMA (50S ribosomal protein L22P OS=Haloarcula marismortui GN=rpl22p PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.341e-14 Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = -2 Query: 300 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 749 + YS E D P + KA + ++ FK+++ A I+ +A YLE V+ Q +PF + GVG ++ GR+P K++K LDLL+NA NA+ +G D +A+ I H+ ++ +Q+ R RA GR + + S +EL L Sbjct: 3 ISYSVEAD-PDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDA---GRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELIL 148
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_AERPE (50S ribosomal protein L22P OS=Aeropyrum pernix GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.993e-14 Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = -2 Query: 306 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 743 YS + + ++ KA ++ VH K E A AI + + +A+RYL V+ ++A+PF R G ++ GR+PVK+A+++L LL N E+NA K LDV+ L I H+ ++ +R RA GR P HIE+ Sbjct: 6 YSVKLRDESEVAKAVLRNVPVHPKIMAEVARAISGMRVDEARRYLRAVIEKREAVPFRRAHGKQAHRRGLADKWGWPVGRYPVKAARYMLKLLDNVEANAANKNLDVERLKIIHVAAHKGITLKRWMPRAWGRATPRNRVHSHIEI 151
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_UNCMA (50S ribosomal protein L22P OS=Uncultured methanogenic archaeon RC-I GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14 Identity = 52/152 (34.21%), Postives = 82/152 (53.95%), Query Frame = -2 Query: 300 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNG--QGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 749 V Y+ E D P + KA ++ V K+ +E IR + L+ AK YL+DV+ K+++PF + VG RH +G GR+PVK++ IL LLK+AE+NAE KGL+ + + I H + + + RA GR + +E+ + Sbjct: 4 VGYTAEFD-PATTAKAMAYEINVSPKHCQEICRQIRGMKLSAAKTYLQDVIDKKRSVPFKQHARNVGH-----KRHQSGWPSGRYPVKASTEILKLLKHAEANAEYKGLETENMRIIHSTSKKGRVIQGIMPRAMGRATAWNIELVTVEVVI 149
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_CENSY (50S ribosomal protein L22P OS=Cenarchaeum symbiosum GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14 Identity = 52/146 (35.62%), Postives = 78/146 (53.42%), Query Frame = -2 Query: 306 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 743 YS E +PT+ +A + ++ K+ RE + IR + + KA+ +L+ V+ K+A+PF RF VG + GR+P KSA + LL N ESNAE KG+D+D L I ++ +R RA GR P + H+EL Sbjct: 6 YSFEGYDPTRHVRASLREKQISHKHAREISLHIRGMTVEKARDFLQAVIEKKRAVPFRRFKRQVGHRSDPGVM----AGRYPEKSAAEFIKLLDNLESNAEYKGMDLDRLTIVGAVAHKGILIKRFIPRAMGRSTPKNNVLTHVEL 147
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_CALMQ (50S ribosomal protein L22P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14 Identity = 50/140 (35.71%), Postives = 68/140 (48.57%), Query Frame = -2 Query: 306 KARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQ------GRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 707 KARG + R+ +K ETA AIR L + +A+ Y+E V K IP F K H N +WPVK A L +L+N ESNA +GL++D I H ++ + R RA GR P+ +IEL Sbjct: 30 KARGFEFRISWKKAIETARAIRFLTIKQAEDYMEKVKDLKAPIPIKEFT--------RKQAHHNVPWDGWPVAKWPVKVADSFLQVLRNLESNASYRGLNIDNTVIVHASASRGMRIRNYMPRALGRATPWFQDTVNIEL 161 The following BLAST results are available for this feature:
BLAST of CF834600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834600 ID=CF834600; Name=CF834600; organism=Citrus sinensis; type=EST; length=870bpback to top |