CF834945

Overview
NameCF834945
Unique NameCF834945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11471 contig Csv1_Contig11471:353..1125. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX1_MYOLU (Peroxiredoxin-1 OS=Myotis lucifugus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.249e-54
Identity = 101/185 (54.59%), Postives = 138/185 (74.59%), Query Frame = 2
Query:    2 DFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            +F A AV  D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AF DR  EF+K+N +++G S DS F HLAW+ T +K GGLG +  PL++D  ++I++ YG+L  D+GI+ RGLFIID +G+++  T+ +L +GRSVD TLR +QA Q+  ++  EVCPAGWKPG  ++KPD + SKEYF+
Sbjct:   14 NFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKINCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKEYFS 196          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX1_BOVIN (Peroxiredoxin-1 OS=Bos taurus GN=PRDX1 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.249e-54
Identity = 103/184 (55.98%), Postives = 137/184 (74.46%), Query Frame = 2
Query:    5 FAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            F A AV  D +F ++ L+DY GK YV+ FFYPLDFTFVCPTEI AF DR  EF+KLN +++G S DS F HLAW+ T +K GGLG +  PLI+D  ++I++ YG+L  D+GI+ RGLFIID +G+++  TI +L +GRSVD TLR +QA Q+  ++  EVCPAGWKPG  ++KPD + SKEYF+
Sbjct:   15 FKATAVMPDGQFKDISLADYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLISDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKEYFS 196          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX1_RAT (Peroxiredoxin-1 OS=Rattus norvegicus GN=Prdx1 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.755e-53
Identity = 102/184 (55.43%), Postives = 135/184 (73.37%), Query Frame = 2
Query:    5 FAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            F A AV  D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AF DR  EF+KLN +++G S DS F HLAW+ T +K GGLG +  PL++D  ++I++ YG+L  D+GI+ RGLFIID +G+++  TI +L +GRSVD  LR +QA Q+  ++  EVCPAGWKPG  ++KPD   SKEYF+
Sbjct:   15 FKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVNKSKEYFS 196          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX4_HUMAN (Peroxiredoxin-4 OS=Homo sapiens GN=PRDX4 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.598e-53
Identity = 99/178 (55.62%), Postives = 130/178 (73.03%), Query Frame = 2
Query:   17 AVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYF 550
            AV D EF  +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR  EF  +NTE++  S DS F+HLAW+ T R+ GGLG ++ PL++D+T  ISK YG+ + D G  LRGLFIID +G+++  T+ +L +GRSVD TLR +QA QY  ++  EVCPAGWKPG +++ PDP    +YF
Sbjct:   92 AVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH-GEVCPAGWKPGSETIIPDPAGKLKYF 267          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX3_PONAB (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Pongo abelii GN=PRDX3 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.698e-53
Identity = 101/185 (54.59%), Postives = 133/185 (71.89%), Query Frame = 2
Query:    5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 559
            F   AV + EF ++ L D+ GK Y++LFFYPLDFTFVCPTEI AF D+  EF  +N E++ VS DS FSHLAW+ T RK+GGLG +   L++D+TK IS+ YG+L+   G+ALRGLFIID  GVI+H ++ +L +GRSV+ TLR ++A QYV E   EVCPA W P   ++KP+P  SKEYF  +
Sbjct:   72 FKGTAVVNGEFKDLSLDDFKGK-YLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYV-ETHGEVCPANWTPDSPTIKPNPAASKEYFQKV 254          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX3_HUMAN (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Homo sapiens GN=PRDX3 PE=1 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 6.136e-53
Identity = 101/185 (54.59%), Postives = 132/185 (71.35%), Query Frame = 2
Query:    5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 559
            F   AV + EF ++ L D+ GK Y++LFFYPLDFTFVCPTEI AF D+  EF  +N E++ VS DS FSHLAW+ T RK+GGLG +   L++D+TK IS+ YG+L+   G+ALRGLFIID  GVI+H ++ +L +GRSV+ TLR ++A QYV E   EVCPA W P   ++KP P  SKEYF  +
Sbjct:   72 FKGTAVVNGEFKDLSLDDFKGK-YLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYV-ETHGEVCPANWTPDSPTIKPSPAASKEYFQKV 254          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX1_MOUSE (Peroxiredoxin-1 OS=Mus musculus GN=Prdx1 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.047e-52
Identity = 101/185 (54.59%), Postives = 136/185 (73.51%), Query Frame = 2
Query:    2 DFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            +F A AV  D +F ++ LS+Y GK YV+ FFYPLDFTFVCPTEI AF DR  EF+KLN +++G S DS F HLAW+ T +K GGLG +  PLI+D  ++I++ YG+L  D+GI+ RGLFIID +G+++  TI +L +GRSVD  +R +QA Q+  ++  EVCPAGWKPG  ++KPD   SKEYF+
Sbjct:   14 NFKATAVMPDGQFKDISLSEYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRADEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLISDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEIIRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVNKSKEYFS 196          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX1_CRIGR (Peroxiredoxin-1 OS=Cricetulus griseus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.047e-52
Identity = 101/185 (54.59%), Postives = 137/185 (74.05%), Query Frame = 2
Query:    2 DFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            +F A AV  D +F ++ LS+Y GK YV+ FFYPLDFTFVCPTEI AF DR  EF+KLN +++G S DS F HLAW+ T +K GGLG +  PL++D  ++I++ YG+L  D+GI+ RGLFIID +G+++  TI +L +GRSVD  LR +QA Q+  ++  EVCPAGWKPG  ++KPD + SKEYF+
Sbjct:   14 NFKATAVMPDGQFRDICLSEYRGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKEYFS 196          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: PRDX3_MOUSE (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Mus musculus GN=Prdx3 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.367e-52
Identity = 101/185 (54.59%), Postives = 131/185 (70.81%), Query Frame = 2
Query:    5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 559
            F   AV + EF  + L D+ GK Y++LFFYPLDFTFVCPTEI AF D+  EF  +N E++ VS DS FSHLAW+ T RK+GGLG +   L++DITK IS+ YG+L+   GIALRGLFIID  GV++H ++ +L +GRSV+ TLR ++A Q+V E   EVCPA W P   ++KP P  SKEYF  +
Sbjct:   73 FKGTAVVNGEFKELSLDDFKGK-YLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDITKQISRDYGVLLESAGIALRGLFIIDPNGVVKHLSVNDLPVGRSVEETLRLVKAFQFV-ETHGEVCPANWTPESPTIKPSPTASKEYFEKV 255          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDX1_BRUMA (Thioredoxin peroxidase 1 OS=Brugia malayi GN=TSA1 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.332e-52
Identity = 102/187 (54.55%), Postives = 136/187 (72.73%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKS-GGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 559
            DF+  AV + +F  + + DY GK ++ILFFYPLDFTFVCPTEITAF DR AEF+KLNTE++  S DS FSHLAW+QT R   GGLGD+K P++AD  K I+ ++G+L  + GI+ RGLF+ID  G I+HS + +L++GRSVD   RTL+A Q+V+++  EVCPA W     ++KP  K SKEYF  +
Sbjct:   41 DFSGTAVVNGDFKTISMKDYKGK-WLILFFYPLDFTFVCPTEITAFSDRCAEFQKLNTELIACSCDSHFSHLAWIQTPRSEVGGLGDMKIPVLADFNKDIANAFGVLDHETGISYRGLFLIDPSGEIRHSLVNDLSVGRSVDEAFRTLKAFQFVEKH-GEVCPANWSDDKPTIKPGIKESKEYFKKV 225          
The following BLAST results are available for this feature:
BLAST of CF834945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
PRDX1_MYOLU7.249e-5454.59Peroxiredoxin-1 OS=Myotis lucifugus GN=PRDX1 PE=1 ... [more]
PRDX1_BOVIN7.249e-5455.98Peroxiredoxin-1 OS=Bos taurus GN=PRDX1 PE=2 SV=1[more]
PRDX1_RAT2.755e-5355.43Peroxiredoxin-1 OS=Rattus norvegicus GN=Prdx1 PE=1... [more]
PRDX4_HUMAN3.598e-5355.62Peroxiredoxin-4 OS=Homo sapiens GN=PRDX4 PE=1 SV=1[more]
PRDX3_PONAB4.698e-5354.59Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX3_HUMAN6.136e-5354.59Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX1_MOUSE1.047e-5254.59Peroxiredoxin-1 OS=Mus musculus GN=Prdx1 PE=1 SV=1[more]
PRDX1_CRIGR1.047e-5254.59Peroxiredoxin-1 OS=Cricetulus griseus GN=PRDX1 PE=... [more]
PRDX3_MOUSE1.367e-5254.59Thioredoxin-dependent peroxide reductase, mitochon... [more]
TDX1_BRUMA2.332e-5254.55Thioredoxin peroxidase 1 OS=Brugia malayi GN=TSA1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834945 ID=CF834945; Name=CF834945; organism=Citrus sinensis; type=EST; length=773bp
TGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTTCATCAATGTCAAGC
TTTCGGATTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCGTTG
GACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCTGTGACCGATA
TGCTGAATTTGAGAAGCTAAACACAGAGATATTGGGTGTCTCAACTGACA
GTGTGTTTTCACACTTGGCATGGGTCCAAACAGACAGAAAGTCAGGTGGT
CTTGGTGATTTGAAGTACCCACTAATTGCTGATATCACCAAATCAATTTC
AAAATCCTATGGTATTCTGATCCCTGATCAGGGAATTGCATTGAGAGGAC
TCTTTATTATTGACAAAGAAGGAGTCATCCAGCACTCAACCATTATCAAC
CTTGCCATTGGTAGGAGTGTTGACTAGACACTGAGAACACTTCAGGCCTT
GCAGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCAGGATGGAAGC
CCGGGGACAAATCCATGAAGCCAGACCCAAAACTCAGCAAGGAGTACTTT
GCAGCTATATAAGAGGGGTTAGCATTGGAACCTCGTATGCATATCTATGT
CTATTAGGGAGGTGTAGATGAGTTTTGTTTTTCCATGTAATGTGATTTTG
CTACTTACTGTTGAGTTTTGCGGAGCAGCCTGTGGGGAATAAATGCATTG
GACTGGATTTGTCCACCTCTTTACTTCCTTTGTAATGCAGACACAACAAA
ATCTCTTGGTATTGTCCTCTTCA
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