CF834945

Overview
NameCF834945
Unique NameCF834945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11471 contig Csv1_Contig11471:353..1125. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDX_ECHGR (Thioredoxin peroxidase OS=Echinococcus granulosus GN=TPX PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.944e-48
Identity = 97/184 (52.72%), Postives = 125/184 (67.93%), Query Frame = 2
Query:    5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 556
            F  +A+ D E  +V LSDY GK YVILFFYP+DFTFVCPTEI AF DR  EF +   ++L  STDS + HLAW    RK GG+  ++ P++AD    IS+ YG+LI DQGIALRGLFIID +GV++  TI +L +GRSVD  LR L A Q+  ++  EVCPA W+PG K+ KP     K + ++
Sbjct:   12 FTCKALVDGELKDVSLSDYRGK-YVILFFYPMDFTFVCPTEIIAFNDRADEFHQRGCQLLACSTDSGYCHLAWNNVSRKEGGVQGMRIPMLADTNHKISRDYGVLIEDQGIALRGLFIIDDKGVLRQITINDLPVGRSVDEALRLLDAFQFTDKH-GEVCPANWQPGSKTFKPSAGDLKSFMSS 193          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: YCF42_ODOSI (Putative peroxiredoxin ycf42 OS=Odontella sinensis GN=ycf42 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.571e-47
Identity = 90/183 (49.18%), Postives = 127/183 (69.40%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYF 550
            +F    V+ +    ++LSDY GKKYVILFFYP +FT + PTE+    DR +EF KL+T+IL +S DS FSHL ++  +R+ GGL DL YPL++D+T++I++ Y +L  D+G+A  GLFIIDKEG+IQ+ T+ NL  GR+++  LR L+++QYV+ENP   CP  W  GD+     P  SK YF
Sbjct:   13 NFLTIGVYKKRLGKIRLSDYRGKKYVILFFYPANFTAISPTELMLLSDRISEFRKLSTQILAISVDSPFSHLQYLLCNREEGGLEDLNYPLVSDLTQTITRDYQVL-TDEGLAFPGLFIIDKEGIIQYYTVNNLLCGRNINELLRILESIQYVKENPGYACPVNWNFGDQVFYSHPLKSKIYF 194          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDX_ONCMY (Peroxiredoxin OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.583e-47
Identity = 97/185 (52.43%), Postives = 126/185 (68.11%), Query Frame = 2
Query:    5 FAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPD-QGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            F A+AV  D +F ++ +SDY GK YV+ FFYPLDFTFVCPTEI AF D   EF K+  E++G S DS F HLAW  T RK GGLG +K PL+AD  +SIS  YG+     +     GLFIID +GV++  TI +L +GR VD  LR +QA Q+  ++  EVCPAGWKPG  ++KPD + SK++F+
Sbjct:   15 FTAKAVMPDGQFKDISMSDYRGK-YVVFFFYPLDFTFVCPTEIIAFSDAAEEFRKIGCEVIGASVDSHFCHLAWTNTPRKHGGLGAMKIPLVADTMRSISTDYGVFEGGMRASPTGGLFIIDDKGVLRQITINDLPVGRCVDEILRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKDFFS 197          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDX1_CAEEL (Probable peroxiredoxin prdx-3 OS=Caenorhabditis elegans GN=prdx-3 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.121e-46
Identity = 93/182 (51.10%), Postives = 121/182 (66.48%), Query Frame = 2
Query:    5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYF 550
            F   AV D +F  +   DY GK ++++FFYPLDFTFVCPTEI A+ DR  EF  L  E++  S DS FSHLAWV T RK GGLGD+  PL+AD  K I+ S+G+L  + G++ RGLF+ID  G ++H+T  +L +GRSVD TLR L+A Q+  +   EVCPA W     ++KP    SKEYF
Sbjct:   42 FKGTAVVDGDFKVISDQDYKGK-WLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLGAEVVACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLDKESGLSYRGLFLIDPSGTVRHTTCNDLPVGRSVDETLRVLKAFQF-SDKHGEVCPADWHEDSPTIKPGVATSKEYF 221          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TSA1_SCHPO (Peroxiredoxin tpx1 OS=Schizosaccharomyces pombe GN=tpx1 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.049e-44
Identity = 92/184 (50.00%), Postives = 127/184 (69.02%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 553
            DF   AV +  F  +KL+DY GK +V L FYPLDFTFVCPTEI AF +  ++F + N +++  STDS +SHLA++ T RK GGLG +  PL+AD +  +S+ YG+LI D G+A RGLF+ID +GV++  TI +L +GRSVD  LR L A Q+V+E+  EVCPA W  G  ++  D K  ++YF+
Sbjct:   11 DFKGTAVVNGAFEEIKLADYKGK-WVFLGFYPLDFTFVCPTEIVAFSEAASKFAERNAQVILTSTDSEYSHLAFINTPRKEGGLGGINIPLLADPSHKVSRDYGVLIEDAGVAFRGLFLIDPKGVLRQITINDLPVGRSVDEALRLLDAFQFVEEH-GEVCPANWHKGSDTI--DTKNPEKYFS 190          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDX_FASHE (Thioredoxin peroxidase OS=Fasciola hepatica PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.370e-44
Identity = 90/185 (48.65%), Postives = 127/185 (68.65%), Query Frame = 2
Query:    2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 556
            +F+ +AV  +EF  + LSDY GK +VIL FYPLDFTFVCPTEI A  D+  +F + N  ++  STDSV+SHL W + DRK GG+G L +PL+AD   S+S+++G+L  +QG   RG F+ID +GV++  T+ +  +GRSV+  LR L A  + +E+  EVCPA WKP  K++ P P  SK YF++
Sbjct:   10 NFSGQAVVGKEFETISLSDYKGK-WVILAFYPLDFTFVCPTEIIAISDQMEQFAQRNCAVIFCSTDSVYSHLQWTKMDRKVGGIGQLNFPLLADKNMSVSRAFGVLDEEQGNTYRGNFLIDPKGVLRQITVNDDPVGRSVEEALRLLDAFIFHEEH-GEVCPANWKPKSKTIVPTPDGSKAYFSS 192          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TSA1_CANAL (Peroxiredoxin TSA1 OS=Candida albicans GN=TSA1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.800e-44
Identity = 87/182 (47.80%), Postives = 125/182 (68.68%), Query Frame = 2
Query:    5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYF 550
            F   AV D  F  V L  Y GK +V+L F PL FTFVCP+EI A+ +   +F + + ++L  STDS ++ LAW    RK GG+G + +P++AD   S+S+ YG+LI ++G+ALRG+F+ID +GV++  TI +L +GRSV+ +LR L+A Q+  E   EVCPA W PGD+++KP P+ SKEYF
Sbjct:   12 FKKTAVVDGVFEEVTLEQYKGK-WVLLAFIPLAFTFVCPSEIIAYSEAVKKFAEKDAQVLFASTDSEYTWLAWTNVARKDGGIGKVDFPVLADTNHSLSRDYGVLIEEEGVALRGIFLIDPKGVLRQITINDLPVGRSVEESLRLLEAFQFT-EKYGEVCPANWHPGDETIKPSPEASKEYF 191          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TSA1_YEAST (Peroxiredoxin TSA1 OS=Saccharomyces cerevisiae GN=TSA1 PE=1 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 1.515e-43
Identity = 93/184 (50.54%), Postives = 120/184 (65.22%), Query Frame = 2
Query:    5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 556
            F   AV D  F  V L  Y GK YV+L F PL FTFVCPTEI AF +   +FE+   ++L  STDS +S LAW    RK GGLG +  PL+AD   S+S+ YG+LI ++G+ALRGLFIID +GVI+H TI +L +GR+VD  LR ++A Q+  +N   V P  W PG  ++KP  + SKEYF A
Sbjct:   12 FKKTAVVDGVFDEVSLDKYKGK-YVVLAFIPLAFTFVCPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKN-GTVLPCNWTPGAATIKPTVEDSKEYFEA 193          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TSA2_YEAST (Peroxiredoxin TSA2 OS=Saccharomyces cerevisiae GN=TSA2 PE=1 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 3.375e-43
Identity = 92/182 (50.55%), Postives = 119/182 (65.38%), Query Frame = 2
Query:    5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYF 550
            F   AV D  F  + L  Y GK YV+L F PL F+FVCPTEI AF D   +FE    ++L  STDS +S LAW    RK GGLG +K PL+AD   S+S+ YG+LI  +GIALRGLFIID +G+I+H TI +L++GR+V+  LR ++  Q+  +N   V P  W PG  ++KPD K SKEYF
Sbjct:   12 FKKTAVVDGIFEEISLEKYKGK-YVVLAFVPLAFSFVCPTEIVAFSDAAKKFEDQGAQVLFASTDSEYSLLAWTNLPRKDGGLGPVKVPLLADKNHSLSRDYGVLIEKEGIALRGLFIIDPKGIIRHITINDLSVGRNVNEALRLVEGFQWTDKN-GTVLPCNWTPGAATIKPDVKDSKEYF 191          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: R20K_CLOPA (Putative peroxiredoxin in rubredoxin operon OS=Clostridium pasteurianum PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.781e-40
Identity = 81/161 (50.31%), Postives = 107/161 (66.46%), Query Frame = 2
Query:   35 FINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSM 517
            F  VKL DY GK ++++FFYPLDFTFVCPTEIT F  R  EF  L  E+L VS DS +SH  W+  D K GGLG + +P+ +D T  +S  YGI I ++GI+LRGLFIID EG++++S + +L +GRSVD TLR L+A Q        +C   W  GD ++
Sbjct:   24 FTEVKLGDYKGK-WLVMFFYPLDFTFVCPTEITGFSKRAEEFRDLKAELLAVSCDSQYSHETWINQDIKQGGLGKINFPIASDKTTEVSTKYGIQIEEEGISLRGLFIIDPEGIVRYSVVHDLNVGRSVDETLRVLKAFQ-----TGGMCALDWHEGDDNL 178          
The following BLAST results are available for this feature:
BLAST of CF834945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TDX_ECHGR5.944e-4852.72Thioredoxin peroxidase OS=Echinococcus granulosus ... [more]
YCF42_ODOSI6.571e-4749.18Putative peroxiredoxin ycf42 OS=Odontella sinensis... [more]
TDX_ONCMY8.583e-4752.43Peroxiredoxin OS=Oncorhynchus mykiss PE=2 SV=1[more]
TDX1_CAEEL1.121e-4651.10Probable peroxiredoxin prdx-3 OS=Caenorhabditis el... [more]
TSA1_SCHPO1.049e-4450.00Peroxiredoxin tpx1 OS=Schizosaccharomyces pombe GN... [more]
TDX_FASHE1.370e-4448.65Thioredoxin peroxidase OS=Fasciola hepatica PE=2 S... [more]
TSA1_CANAL6.800e-4447.80Peroxiredoxin TSA1 OS=Candida albicans GN=TSA1 PE=... [more]
TSA1_YEAST1.515e-4350.54Peroxiredoxin TSA1 OS=Saccharomyces cerevisiae GN=... [more]
TSA2_YEAST3.375e-4350.55Peroxiredoxin TSA2 OS=Saccharomyces cerevisiae GN=... [more]
R20K_CLOPA7.781e-4050.31Putative peroxiredoxin in rubredoxin operon OS=Clo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834945 ID=CF834945; Name=CF834945; organism=Citrus sinensis; type=EST; length=773bp
TGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTTCATCAATGTCAAGC
TTTCGGATTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCGTTG
GACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCTGTGACCGATA
TGCTGAATTTGAGAAGCTAAACACAGAGATATTGGGTGTCTCAACTGACA
GTGTGTTTTCACACTTGGCATGGGTCCAAACAGACAGAAAGTCAGGTGGT
CTTGGTGATTTGAAGTACCCACTAATTGCTGATATCACCAAATCAATTTC
AAAATCCTATGGTATTCTGATCCCTGATCAGGGAATTGCATTGAGAGGAC
TCTTTATTATTGACAAAGAAGGAGTCATCCAGCACTCAACCATTATCAAC
CTTGCCATTGGTAGGAGTGTTGACTAGACACTGAGAACACTTCAGGCCTT
GCAGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCAGGATGGAAGC
CCGGGGACAAATCCATGAAGCCAGACCCAAAACTCAGCAAGGAGTACTTT
GCAGCTATATAAGAGGGGTTAGCATTGGAACCTCGTATGCATATCTATGT
CTATTAGGGAGGTGTAGATGAGTTTTGTTTTTCCATGTAATGTGATTTTG
CTACTTACTGTTGAGTTTTGCGGAGCAGCCTGTGGGGAATAAATGCATTG
GACTGGATTTGTCCACCTCTTTACTTCCTTTGTAATGCAGACACAACAAA
ATCTCTTGGTATTGTCCTCTTCA
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