CF834945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: AHPC_SALTI (Alkyl hydroperoxide reductase subunit C OS=Salmonella typhi GN=ahpC PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.602e-31 Identity = 68/173 (39.31%), Postives = 103/173 (59.54%), Query Frame = 2 Query: 5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523 F +A + EFI V D G+ + + FFYP DFTFVCPTE+ D Y E +KL ++ VSTD+ F+H AW + S + +KY +I D T ++++++ + D+G+A R F++D +G+IQ + IGR LR ++A QYV +P EVCPA WK G+ ++ P Sbjct: 11 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAP 179
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: AHPC_ECOLI (Alkyl hydroperoxide reductase subunit C OS=Escherichia coli (strain K12) GN=ahpC PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.602e-31 Identity = 67/173 (38.73%), Postives = 103/173 (59.54%), Query Frame = 2 Query: 5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523 F +A + EFI + D G+ + + FFYP DFTFVCPTE+ D Y E +KL ++ VSTD+ F+H AW + S + +KY +I D T ++++++ + D+G+A R F++D +G+IQ + IGR LR ++A QYV +P EVCPA WK G+ ++ P Sbjct: 11 FKNQAFKNGEFIEITEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVASHPGEVCPAKWKEGEATLAP 179
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: AHPC_ECOL6 (Alkyl hydroperoxide reductase subunit C OS=Escherichia coli O6 GN=ahpC PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.602e-31 Identity = 67/173 (38.73%), Postives = 103/173 (59.54%), Query Frame = 2 Query: 5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523 F +A + EFI + D G+ + + FFYP DFTFVCPTE+ D Y E +KL ++ VSTD+ F+H AW + S + +KY +I D T ++++++ + D+G+A R F++D +G+IQ + IGR LR ++A QYV +P EVCPA WK G+ ++ P Sbjct: 11 FKNQAFKNGEFIEITEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVASHPGEVCPAKWKEGEATLAP 179
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: AHPC_ECO57 (Alkyl hydroperoxide reductase subunit C OS=Escherichia coli O157:H7 GN=ahpC PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.602e-31 Identity = 67/173 (38.73%), Postives = 103/173 (59.54%), Query Frame = 2 Query: 5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523 F +A + EFI + D G+ + + FFYP DFTFVCPTE+ D Y E +KL ++ VSTD+ F+H AW + S + +KY +I D T ++++++ + D+G+A R F++D +G+IQ + IGR LR ++A QYV +P EVCPA WK G+ ++ P Sbjct: 11 FKNQAFKNGEFIEITEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVASHPGEVCPAKWKEGEATLAP 179
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: YNDH_BACYN (Putative peroxiredoxin in ndh 5'region (Fragment) OS=Bacillus sp. (strain YN-1) PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.589e-30 Identity = 66/164 (40.24%), Postives = 101/164 (61.59%), Query Frame = 2 Query: 32 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523 EFI V + G+ + +L FYP DFTFVCPTE+ + YA ++L E+ STD+ F+H W + S +G + Y +I D ++++S+++ +L G+A RG FIID +GV+Q + I IGR + ++A QYV+ NP EVCPA W+ GD+++KP Sbjct: 1 EFIEVSEESFKGQ-WSVLCFYPADFTFVCPTELEDLQNEYAALKELGVEVFSASTDTHFTHKGWHDS---SETIGKITYAMIGDPSQTLSRNFDVLNEVSGLADRGTFIIDPDGVVQAAEINAEGIGRDASTLVNKIKAAQYVRNNPGEVCPAKWQEGDETLKP 160
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_THEVO (Probable peroxiredoxin OS=Thermoplasma volcanium GN=TV1123 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.245e-29 Identity = 63/162 (38.89%), Postives = 105/162 (64.81%), Query Frame = 2 Query: 44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDP 529 + LS+Y GK +V+LF +P DFT VC TE AF +RY +F+KL E++G+S DSVFSH+AW++ ++ G+ D+ +P+IADI K +++ Y ++ G +RG+FIID +++ GR+++ +R ++ALQ+ + PA W+PG + ++P P Sbjct: 21 ITLSNYRGK-WVLLFSHPGDFTPVCTTEFIAFTERYEDFQKLGVELIGLSIDSVFSHIAWIRDIKEHFGI-DIPFPIIADIDKEVAREYNLIDEKSGATVRGVFIIDPNQIVRWMIYYPAETGRNIEEIIRVIKALQFNWDR-KLATPANWQPGQEGIEPAP 179
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: AHPC_BACSU (Alkyl hydroperoxide reductase subunit C OS=Bacillus subtilis GN=ahpC PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.124e-29 Identity = 68/173 (39.31%), Postives = 105/173 (60.69%), Query Frame = 2 Query: 5 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523 F A+A + EFI+V D G+ + + FYP DF+FVCPTE+ ++YA ++L E+ VSTD+ F H W + K + + Y +I D +++IS+++ +L + G+A RG FIID +GVIQ I IGR + ++A QYV++NP EVCPA W+ G +++ P Sbjct: 11 FEAKAFKNGEFIDVTNEDLKGQ-WSVFCFYPADFSFVCPTELEDLQEQYAALKELGVEVYSVSTDTHFVHKGWHDSSEK---ISKITYAMIGDPSQTISRNFDVLDEETGLADRGTFIIDPDGVIQTVEINAGGIGRDASNLVNKVKAAQYVRQNPGEVCPAKWEEGGETLTP 179
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: AHPC_STAES (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ahpC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.798e-28 Identity = 64/164 (39.02%), Postives = 101/164 (61.59%), Query Frame = 2 Query: 32 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523 EF V D+ G V+ F YP DF+FVCPTE+ ++YA+ ++L + VSTD+ F H AW S + L+Y +I D +++I++++ +L + G+A RG FIID +GV+Q + I IGR + ++A QYV+++P EVCPA W+ G +S++P Sbjct: 22 EFKEVTQEDFKGSWNVVCF-YPADFSFVCPTELEDLQNQYAKLQELGVNVYSVSTDTHFVHKAWHD---HSDAISKLEYSMIGDPSQTITRNFDVLDEESGLAQRGTFIIDPDGVVQAAEINADGIGRDASTLVNKIKAAQYVRQHPGEVCPAKWEEGSESLQP 181
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: AHPC_STAEQ (Alkyl hydroperoxide reductase subunit C OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ahpC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28 Identity = 64/164 (39.02%), Postives = 101/164 (61.59%), Query Frame = 2 Query: 32 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 523 EF V D+ G V+ F YP DF+FVCPTE+ ++YA+ ++L + VSTD+ F H AW S + L+Y +I D +++I++++ +L + G+A RG FIID +GV+Q + I IGR + ++A QYV+++P EVCPA W+ G +S++P Sbjct: 22 EFKEVTQEDFKGSWNVVCF-YPADFSFVCPTELEDLQNQYAKLQELGVNVYSVSTDTHFVHKAWHD---HSDAISKLEYSMIGDPSQTITRNFDVLDEETGLAQRGTFIIDPDGVVQAAEINADGIGRDASTLVNKIKAAQYVRQHPGEVCPAKWEEGSESLQP 181
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDX_ENCCU (Putative thioredoxin peroxidase OS=Encephalitozoon cuniculi GN=ECU03_1190 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.067e-28 Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 2 DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDK 511 D +A D E + L DYIGK YV+L FYPLDFTFVCPTEI F D F + N +L +S DSV++H AW R+ G+ +P++ D + + +G+ + G +R I+ K+ ++H + AIGRSVD +R + A+ + EN D +CPA W+ +K Sbjct: 8 DSKYKAFVDGEIKEISLQDYIGK-YVVLAFYPLDFTFVCPTEINRFSDLKGAFLRRNAVVLLISCDSVYTHKAWASIPREQNGVLGTAWPMVWDAKRELCNQFGLYDEENGHPMRSTVILAKDLSVRHISSNYHAIGRSVDEIIRLIDAITFNDENGD-ICPAEWRSENK 175 The following BLAST results are available for this feature:
BLAST of CF834945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834945 ID=CF834945; Name=CF834945; organism=Citrus sinensis; type=EST; length=773bpback to top |