CF834945

Overview
NameCF834945
Unique NameCF834945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11471 contig Csv1_Contig11471:353..1125. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_SULSO (Probable peroxiredoxin OS=Sulfolobus solfataricus GN=SSO2121 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.985e-24
Identity = 62/172 (36.05%), Postives = 102/172 (59.30%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIA-LRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKP----GDKSMKPDPKLSKE 544
            +KL D    ++ +LF +P DFT VC TE  +F  +Y EF+KLNTE++G+S DS  SH+ W+    K+  + ++ +P+IAD   +++K  G++      A +R +F++D +GV++      + IGR++D  LR ++ALQ V +    V PA W      GDK + P P+  K+
Sbjct:   25 IKLPDDYKGRWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWIMWIEKNLKV-EIPFPIIADPMGNVAKRLGMIHAQSSTATVRAVFVVDDKGVVRLILYYPMEIGRNIDEILRAIRALQLV-DKAGVVTPANWPNNELIGDKVINPAPRTIKD 194          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_STAMF (Probable peroxiredoxin OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=Smar_0058 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23
Identity = 62/172 (36.05%), Postives = 98/172 (56.98%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGIL-IPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKP----GDKSMKPDPKLSKE 544
            +KL DY   KY +LF +P DFT VC TE  AF  RY +F+KLNTE++G+S DS FSH+ W++  ++  G+ ++ +P++AD   +++   G+L        +R +F+ID  G+I+      L  GR++D  LR ++A+Q + +      PA W      GD  + P     KE
Sbjct:   24 IKLPDYFKGKYWVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSNFSHIKWIEWIKEKLGV-EIPFPIMADPRGTVASKLGMLHAASSTHTVRAVFVIDPNGIIRAIIYYPLDNGRNIDEILRLVKAIQ-ITDKYGRATPANWPNNELIGDSVIVPPAGTVKE 193          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_ARCFU (Probable peroxiredoxin OS=Archaeoglobus fulgidus GN=AF_0270 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.741e-23
Identity = 62/167 (37.13%), Postives = 99/167 (59.28%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWK----PGDKSMKPDP 529
            +KL +    K+ +LF +P DFT VC TE  AF +RY EF KLN E++G+S D VFSH+ W++  ++   + ++++P+IAD T  +++  G++ P +G   +R +FI+D E VI+        +GR++D  LR ++ALQ   +N     PA W      GD  + P P
Sbjct:   21 MKLPEAFKGKWFVLFSHPADFTPVCTTEFVAFQNRYDEFRKLNCELIGLSIDQVFSHIKWIEWIKEKLDI-EIEFPVIADDTGRVAEMLGLIHPAKGTNTVRAVFIVDPEAVIRAVIYYPQELGRNMDEILRAVKALQVSDQN-GVAMPANWPNNELVGDAVIIPPP 185          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_METJA (Probable peroxiredoxin OS=Methanocaldococcus jannaschii GN=MJ0736 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.274e-23
Identity = 59/158 (37.34%), Postives = 96/158 (60.76%), Query Frame = 2
Query:   44 VKLSDYIGKK--YVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQG-IALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGD 508
            +KL DY  +K  + +LF +P DFT VC TE   F  RY EF KLNTE++G+S D VFSHL WV+  ++   + ++++P+IAD    +++  G++ P +G   +R +F++D +G+I+        +GR++D  +R ++ALQ V +      PA W   D
Sbjct:   20 IKLPDYYVEKGKWFVLFSHPADFTPVCTTEFVGFQKRYDEFRKLNTELIGLSIDQVFSHLKWVEWIKEKLNV-EIEFPIIADDRGELAEKLGMISPYKGNNTVRAVFVVDNKGIIRAIIYYPQEVGRNLDEIVRLVKALQ-VSDEKGVAMPANWPEND 175          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_METMA (Probable peroxiredoxin OS=Methanosarcina mazei GN=MM_0814 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.602e-22
Identity = 63/171 (36.84%), Postives = 94/171 (54.97%), Query Frame = 2
Query:   44 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWV-----QTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI--ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDE--VCPAGWKPGDKSMKPDP 529
            +K  D    K+VILF +P DFT VC TE   F     EF  +NTE++G+S DSVFSH+AW+     + + K     ++K+P+I D+   ++K YG++ P      A+R +FIID E  I+       + GR++    R + AL   Q+N  E    PA W+PG+  + P P
Sbjct:   20 IKFPDDYKGKWVILFSHPADFTPVCTTEFMTFASMQEEFRSMNTELIGLSIDSVFSHIAWLKRIEEKIEYKGMKNLEIKFPVIEDLKMDVAKKYGMVQPKASTTQAVRAVFIIDPEAKIRTILYYPQSTGRNMQEIKRIVVAL---QKNAAEKVATPANWQPGEDVIIPPP 187          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH1_THETN (Probable peroxiredoxin 1 OS=Thermoanaerobacter tengcongensis GN=TTE0270 PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22
Identity = 57/134 (42.54%), Postives = 85/134 (63.43%), Query Frame = 2
Query:   56 DYIGKKYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQ 454
            DY GK +V LF +P DFT VC TE   F  +  EF++LNTE++G+S D VFSH+ WV+  + + G+  + +P+IAD    +S   G++ P +G   +R +FI+D +GVI+        +GR+VD  LR L+ALQ
Sbjct:   25 DYAGKWFV-LFSHPADFTPVCTTEFVEFARKAEEFKQLNTELIGLSVDQVFSHIKWVEWIKDNTGV-QIPFPVIADELGRVSNQLGMIHPGKGTNTVRAVFIVDDKGVIRLIMYYPQEVGRNVDEILRALKALQ 156          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH1_SULME (Probable peroxiredoxin 1 OS=Sulfolobus metallicus PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21
Identity = 52/158 (32.91%), Postives = 89/158 (56.33%), Query Frame = 2
Query:   71 KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKE 544
            K++ LF +P DFT VC TE   F   Y EF++LN E++G+S DS++SH+ W++  ++  G+  + +PLIAD  K +++   I+    G+ +R +F+++ EG+I+      +  GR ++  LR  +A   V        P  W+PG + + P P    E
Sbjct:   30 KWLFLFAHPADFTPVCTTEFVGFSKVYEEFKRLNVELVGMSVDSIYSHIEWLKDIQERYGI-QVPFPLIADPDKRLARLLDIIDEASGVTIRAVFLVNPEGIIRFMAYYPIEYGRKIEELLRITKA-ALVNYKAKVSLPVDWEPGQEVIVPAPSTIDE 185          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH2_SULME (Probable peroxiredoxin 2 OS=Sulfolobus metallicus PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.742e-21
Identity = 56/164 (34.15%), Postives = 89/164 (54.27%), Query Frame = 2
Query:   56 DYIGK-KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKE 544
            D  GK K++ LF +P DFT VC TE   F   Y +F  L  +++G+S DSV+SH+ W++  ++  G+  + +P+IAD  K  ++   I+    G  +RG+F++  +GVI+      L  GR +   LR  +A+  V      V PA W+PG   + P P +  E
Sbjct:   24 DIFGKGKWLFLFAHPADFTPVCTTEFVEFSKAYNDFANLGVQLVGLSVDSVYSHIEWLKDIQEKYGI-KVPFPVIADPDKKFARLLDIVDEASGQTIRGVFLVSPDGVIRFIAYYPLEAGRKISELLRITKAM-IVNYKAKVVLPANWEPGQDVIVPPPNVFDE 185          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH1_SULTO (Probable peroxiredoxin 1 OS=Sulfolobus tokodaii GN=ST0584 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 56/164 (34.15%), Postives = 89/164 (54.27%), Query Frame = 2
Query:   56 DYIGK-KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGIALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKE 544
            D  GK K++ LF +P DFT VC TE  AF  +Y EF+KL  E++G+S DS++SH+ W+    +  G+  + +P+IAD  K +++    L    G  +R + +   +G+I+      +  GR++D  LR  +A   V      V PA W+PG   + P P +  E
Sbjct:   25 DIFGKGKWLFLFAHPADFTPVCTTEFVAFSQKYEEFKKLGVELVGLSVDSIYSHIQWLMDIEQRYGV-KVPFPVIADPDKKLARMLDALDEASGQTIRIVVLASPDGIIRFVAQYPMEFGRNIDELLRITKA-AIVNYKAKVVLPANWQPGQDVIVPPPAIFDE 186          
BLAST of CF834945 vs. ExPASy Swiss-Prot
Match: TDXH_METVS (Probable peroxiredoxin OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0492 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.802e-20
Identity = 61/180 (33.89%), Postives = 102/180 (56.67%), Query Frame = 2
Query:   17 AVFDQEFINVKLSDYIGK-----------KYVILFFYPLDFTFVCPTEITAFCDRYAEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGILIPDQGI-ALRGLFIIDKEGVIQHSTIINLAIGRSVD*TLRTLQALQYVQENPDEVCPAGWKPGDKSMK 520
            AV  ++F +V+L    GK           K+ +LF +P DFT VC TE  AF  RY +F +LNTE++G+S D VFSH+ WV+  ++   + D+++P+IAD    ++   G++ P +G   +R +F++D  G I+        +GR++D  +R ++ALQ   +      PA W P ++ +K
Sbjct:    2 AVIGEKFPDVELLTTHGKLKLPEHFIEAGKWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRELNTELIGLSIDQVFSHIKWVEWIKEKLDV-DIEFPIIADERGDLAVKLGMISPFKGSNTVRAVFVVDATGTIRAIIYYPQEVGRNMDEVVRLVKALQTADKG--YATPADW-PNNELLK 177          
The following BLAST results are available for this feature:
BLAST of CF834945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TDXH_SULSO5.985e-2436.05Probable peroxiredoxin OS=Sulfolobus solfataricus ... [more]
TDXH_STAMF1.021e-2336.05Probable peroxiredoxin OS=Staphylothermus marinus ... [more]
TDXH_ARCFU1.741e-2337.13Probable peroxiredoxin OS=Archaeoglobus fulgidus G... [more]
TDXH_METJA2.274e-2337.34Probable peroxiredoxin OS=Methanocaldococcus janna... [more]
TDXH_METMA5.602e-2236.84Probable peroxiredoxin OS=Methanosarcina mazei GN=... [more]
TDXH1_THETN9.555e-2242.54Probable peroxiredoxin 1 OS=Thermoanaerobacter ten... [more]
TDXH1_SULME1.248e-2132.91Probable peroxiredoxin 1 OS=Sulfolobus metallicus ... [more]
TDXH2_SULME4.742e-2134.15Probable peroxiredoxin 2 OS=Sulfolobus metallicus ... [more]
TDXH1_SULTO8.089e-2134.15Probable peroxiredoxin 1 OS=Sulfolobus tokodaii GN... [more]
TDXH_METVS1.802e-2033.89Probable peroxiredoxin OS=Methanococcus vannielii ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834945 ID=CF834945; Name=CF834945; organism=Citrus sinensis; type=EST; length=773bp
TGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTTCATCAATGTCAAGC
TTTCGGATTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCGTTG
GACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCTGTGACCGATA
TGCTGAATTTGAGAAGCTAAACACAGAGATATTGGGTGTCTCAACTGACA
GTGTGTTTTCACACTTGGCATGGGTCCAAACAGACAGAAAGTCAGGTGGT
CTTGGTGATTTGAAGTACCCACTAATTGCTGATATCACCAAATCAATTTC
AAAATCCTATGGTATTCTGATCCCTGATCAGGGAATTGCATTGAGAGGAC
TCTTTATTATTGACAAAGAAGGAGTCATCCAGCACTCAACCATTATCAAC
CTTGCCATTGGTAGGAGTGTTGACTAGACACTGAGAACACTTCAGGCCTT
GCAGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCAGGATGGAAGC
CCGGGGACAAATCCATGAAGCCAGACCCAAAACTCAGCAAGGAGTACTTT
GCAGCTATATAAGAGGGGTTAGCATTGGAACCTCGTATGCATATCTATGT
CTATTAGGGAGGTGTAGATGAGTTTTGTTTTTCCATGTAATGTGATTTTG
CTACTTACTGTTGAGTTTTGCGGAGCAGCCTGTGGGGAATAAATGCATTG
GACTGGATTTGTCCACCTCTTTACTTCCTTTGTAATGCAGACACAACAAA
ATCTCTTGGTATTGTCCTCTTCA
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