CF835127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB4_ORYSJ (Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.198e-23 Identity = 68/221 (30.77%), Postives = 107/221 (48.42%), Query Frame = 2 Query: 83 TYSRATYYGSPDSLGTPT--GACGFGEYGR-TVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTDFI--LSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQ------EWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWK 712 T +RAT+YG P+ G GACGF + G L+K+G GCG+CY++RC Q C F LS A+GR+A P + +L G++++EF RVPC + G + F V E S P Y A+ + Y G DV+ V++ + W MR ++G+++ + + ++ +G T +VANN IP++W+ Sbjct: 56 TKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQSCSGRSETVIITDMNYYPVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSN-PVYFAVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNESGKT-LVANNVIPANWR 274
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: MPAH1_HOLLA (Major pollen allergen Hol l 1 OS=Holcus lanatus PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.551e-23 Identity = 74/255 (29.02%), Postives = 126/255 (49.41%), Query Frame = 2 Query: 2 LQMALYQYYLLSVMLLLPALCYSHYTSTY------SRATYYGSPDSLGTPT--GACGFGEYGRT-VNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTD--FILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYK-GYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPE--GAISLRFQVSGSAGLTWVVANNAIPSDWKAGVA 724 L AL+ +L S + + T+TY +++T+YG P G GACG+ + + + G + ++K+G GCG+C++++C P+ C F LS A+G MA + +L S G + ++FRRV C Y G F V + S P+YLA+ + Y+ G DV+AV+I ++ +W+ ++ ++GAV+ + +P + G ++R+ G T A + IP WKA A Sbjct: 11 LVAALFAVFLGSAHGIAKVPPGPNITATYGDEWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKDGRGCGSCFEIKCTKPESCSGEPVTVHITDDNEEPIAPYHFDLSGHAFGSMAKKGEEQKLRSAGELELKFRRVKCKYPDGTKPTFHVEKGSN-PNYLALLVKYIDGDGDVVAVDIKEKGKDKWIELKESWGAVWRVDTPDKLTGPFTVRYTTEGG---TKGEAEDVIPEGWKADTA 261
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.551e-23 Identity = 67/218 (30.73%), Postives = 105/218 (48.17%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGEYGR-TVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXX--KTDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQ------EWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDW 709 +RAT+YG+P G GACGF + + G ++K+G GCG+CYQ+RC C + F LS A+G MA P + +L G+++++FRRVPC Y G + F V E S P Y A+ + Y DV+ V++ + W MR ++G+++ + S ++ +G T +VANN IP++W Sbjct: 47 ARATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPSCSGNIETVIITDMNYYPVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSN-PVYFAVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDSGKT-LVANNVIPANW 262
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23 Identity = 77/249 (30.92%), Postives = 126/249 (50.60%), Query Frame = 2 Query: 8 MALYQYYLLSVMLLLPALCYSHYTSTYSR-----ATYYGSPDSLGTPTGACGFGEYGRTVN-DANVAGVSR-LWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXK------TDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDI-SSPPEGAISLRF-QVSGSAGLTWVVANNAIPSDW 709 + ++ + L+S P L +S+ +R AT+YGS + G+ GACG+G A V VS L+K G GCGACY+VRC +C T F LS A+G MA+P + + + G++N+ +RR C Y+G N+ F V+ S ++L++ I Y G+ D+ ++ I Q +EW++M+ +GA + I P +G S++ +S + L+ A + IPS+W Sbjct: 11 LCVFLHLLISGSGSTPPLTHSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGST-DYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLS---ATDVIPSNW 255
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB1_MAIZE (Expansin-B1 OS=Zea mays GN=EXPB1 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22 Identity = 70/220 (31.82%), Postives = 117/220 (53.18%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGEYGRTVNDANVAGVSR-----LWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTD--FILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYK-GYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVF--DISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWK 712 +RAT+YG P+ G P GACG + VN +G++ ++K+G GCG+CY+VRCK C F LS +A+G +A P + ++ G+++VEFRRV C Y G + F + + P+YLA+ + YVA D++ +EI + EW M+ ++GA++ D + +G S+R ++ +G V+A + IP++W+ Sbjct: 46 ARATWYGQPNGAGAPDNGGACGI----KNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCN-PNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIR--LTSESGKK-VIAKDVIPANWR 257
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22 Identity = 71/222 (31.98%), Postives = 116/222 (52.25%), Query Frame = 2 Query: 95 ATYYGSPDSLGTPTGACGF-GEYGRT-VNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXK-----TDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQ----EWVAMRRAFGAVFDISSPP---EGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 AT+YG + GT GACG+ G+ G+ N AG ++++G GCG+CYQV+C C F LS A+G MA P + +L + G + V++ RVPC ++G ++ F+V S +YLA+ + G D+ AV++ Q W AM++++GAV+ +S P + +S+R ++ +G T +VA+N IP+ W+ G Sbjct: 43 ATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPSCSGKPVTVVLTDLCPGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSN-QYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNSGPAPLQAPMSIR--LTSGSGRT-LVASNVIPAGWQPG 260
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.729e-22 Identity = 67/219 (30.59%), Postives = 110/219 (50.23%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGE-----YGRTVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKT--DFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYK-GYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVF--DISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDW 709 +RAT+YG P G+ GACG Y ++ NV ++K+G GCG+CY+V+C+ P C + F S +A+G MA P K EL G+++++FRRV C Y G + F V + S P+YLA+ + +VA DV+ +++ + W M+ ++GA++ D ++P + S+R L +A + IP +W Sbjct: 46 ARATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVP----IFKDGRGCGSCYEVKCEQPAACSKQPVTVFITDMNYEPISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSN-PNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTATPLKAPFSIRVTTESGKSL---IAKDVIPVNW 256
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: MPAP1_PHAAQ (Major pollen allergen Pha a 1 OS=Phalaris aquatica PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22 Identity = 64/217 (29.49%), Postives = 109/217 (50.23%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGEYGRT-VNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTD--FILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYK-GYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPE--GAISLRFQVSGSAGLTWVVANNAIPSDWKA 715 +++T+YG P G GACG+ + + N G + ++K+G GCG+C++++C P+ C F LS A+G MA + + G + ++FRRV C Y G F V + S P+YLA+ + YV G DV+AV+I ++ +W+ ++ ++GA++ I +P + G ++R+ G T + IP WKA Sbjct: 50 AKSTWYGKPTGAGPKDNGGACGYKDVDKAPFNGMTGCGNTPIFKDGRGCGSCFELKCSKPESCSGEPITVHITDDNEEPIAPYHFDLSGHAFGSMAKKGEEENVRGAGELELQFRRVKCKYPDGTKPTFHVEKGSN-PNYLALLVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGG---TKAEFEDVIPEGWKA 262
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: MPAL1_LOLPR (Pollen allergen Lol p 1 OS=Lolium perenne PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22 Identity = 64/216 (29.63%), Postives = 106/216 (49.07%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGEYGRT-VNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTD--FILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPE--GAISLRFQVSGSAGLTWVVANNAIPSDWKA 715 +++T+YG P G GACG+ + N G + ++K+G GCG+C++++C P+ C F LS A+G MA + + S G + ++FRRV C Y E + P+YLAI + YV G DV+AV+I ++ +W+ ++ ++GAV+ I +P + G ++R+ G T + IP WKA Sbjct: 44 AKSTWYGKPTGAGPKDNGGACGYKNVDKAPFNGMTGCGNTPIFKDGRGCGSCFEIKCTKPESCSGEAVTVTITDDNEEPIAPYHFDLSGHAFGSMAKKGEEQNVRSAGELELQFRRVKCKYPDDTKPTFHVEKASNPNYLAILVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAVWRIDTPDKLTGPFTVRYTTEGG---TKSEFEDVIPEGWKA 256
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB9_MAIZE (Expansin-B9 OS=Zea mays GN=EXPB9 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22 Identity = 70/220 (31.82%), Postives = 117/220 (53.18%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGEYGRTVNDANVAGVSR-----LWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTD--FILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWY-KGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVF--DISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWK 712 +RAT+YG P+ G P GACG + VN +G++ ++K+G GCG+CY+VRCK C F LS +A+G +A P + +L G+++VEFRRV C Y G + F + E P+Y+A+ + +VA D++ +EI + EW M+ ++GA++ D + +G S+R ++ +G V+A + IP++W+ Sbjct: 46 ARATWYGQPNGAGAPDNGGACGI----KNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHI-EKGCNPNYVAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIR--LTSESGKK-VIAKDIIPANWR 257 The following BLAST results are available for this feature:
BLAST of CF835127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835127 ID=CF835127; Name=CF835127; organism=Citrus sinensis; type=EST; length=725bpback to top |