CF835127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13 Identity = 59/238 (24.79%), Postives = 111/238 (46.64%), Query Frame = 2 Query: 41 MLLLPALCYSHYTSTY--SRATYYGSPDSLGTPTGACGFGE-YGRTVNDANVAGVSRLWKNGTGCGACYQVRC---KVPQLCXXXXXXXXXXXXXXXXKTD-----FILSPRAYGRMALPD-KSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 +L + ALC + S + AT+YG D GT GACG+G Y + N A + L+ +G CG CY + C K P C D + + R + M+ P ++ +Y+ G++ + +++V CW G ++F + + + ++ + + +AG + ++ + + W+ M R +GA + + G +L F V+ + G T +V ++A+P+ W G Sbjct: 8 LLAVVALCIAPARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYG-GVRFTI---NGFNYFELVLVTNMAGSGSIASMSV-KGSCTGWIQMTRNWGANWQCLAGLAGQ-ALSFNVTSTGGQT-IVFDDAVPAGWSFG 238
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 59/220 (26.82%), Postives = 95/220 (43.18%), Query Frame = 2 Query: 86 YSRATYYGSPDSLGTPTGACGFGEYGRTVNDANVAGVSR-LWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKT-------DFILSPRAYGRMALPDKSAELY-SYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 Y+ AT+YG T GACG+G + + A +S L+ +G GCG C+Q+ C C + PR + MA P Y G++ V +RRVPC G ++F+ NS ++L I ++ V G D+ ++ + + W++M +GA + S G SL F+V+ + A N P++W G Sbjct: 39 YAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSG-GMRFQFQGNS---YWLLIFVMNVGGAGDIKSMAV-KGSRTNWISMSHNWGASYQAFSSLYGQ-SLSFRVTSYTTGETIYAWNVAPANWSGG 252
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 61/238 (25.63%), Postives = 110/238 (46.22%), Query Frame = 2 Query: 41 MLLLPALCYSHYTSTYSR--ATYYGSPDSLGTPTGACGFGE-YGRTVNDANVAGVSRLWKNGTGCGACYQVRC---KVPQLCXXXXXXXXXXXXXXXXKTD-----FILSPRAYGRMALPD-KSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 +L + ALC + S + + AT+YG D GT GACG+G Y + N A + L+ NG CG CY + C K P C D + + R + M+ P ++ +YS G+V + +++V CW G ++F + + ++ + + +AG + ++ + + W+ M R +GA + + G +L F V+ + G T +V ++ +P+ W G Sbjct: 8 LLAILALCIAPARSGWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPYGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSG-GVRFTI---TGLNYFELVLVTNMAGSGSIASMSV-KGSSTGWIQMSRNWGANWQCLAGLAGQ-ALSFTVTSTGGQT-IVFDSVVPAGWSFG 238
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 63/224 (28.12%), Postives = 103/224 (45.98%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPTGACGFGE-YGRTVNDANVAGVSRLWKNGTGCGACYQVRC-----------KVPQLCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPD--KSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 + AT+YG D+ GT GACG+G Y + N A + L+ +G CGAC++++C P + + PR + +A+P AE Y G+V V +RRVPC KG ++F + + + ++ + I VAG D++ + + W+ M R +G + +S G +L F+V+GS T + NA P+ W G Sbjct: 39 AHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAE-YRAGIVPVSYRRVPCRKKG-GVRFTI---NGFRYFNLVLITNVAGAGDIVRASV-KGTSTGWMPMSRNWGQNWQSNSVLVGQ-ALSFRVTGSDRRT-STSWNAAPAGWHFG 254
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 67/242 (27.69%), Postives = 103/242 (42.56%), Query Frame = 2 Query: 29 LLSVMLLLPALCYSHYTSTYSRATYYGSPDSLGTPTGACGFGE-YGRTVNDANVAGVSRLWKNGTGCGACYQVRCKVPQ----------LCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPD-KSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 +L V++ L A + + AT+YG D GT GACG+G Y N A S L+ +G CGACY + C Q + + PR + M+ P ++ +Y G+V V ++RVPC G ++F + S + ++ + + V G V + I + W+AM R +GA + ++ G SL F V G V A N PS+W G Sbjct: 11 MLLVLVTLCAFACKRSVAQSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSG-GIRFAI---SGHDYFELVTVTNVGGSGVVAQMSI-KGSNTGWMAMSRNWGANWQSNAYLAGQ-SLSFIVQLDDGRK-VTAWNVAPSNWFFG 245
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12 Identity = 64/218 (29.36%), Postives = 104/218 (47.71%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPTGACGFGEYGRTVNDANVAGVS-RLWKNGTGCGACYQVRC-KVPQLC--XXXXXXXXXXXXXXXXKTDFIL--SPRAYGRMALPD--KSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 +RAT+YG T GACG+G+ + A +S L+ G CGACYQ+ C PQ C KT+ + P+ + ++LP K A+ Y GVV V++RR+ C G ++F+ N P++L I V G D+ +++ + D W+ M++ +G + G + F+V+ S G+T NN +P++W G Sbjct: 51 ARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQ-YKAGVVPVKYRRISCARTG-GVKFETKGN---PYFLMILPYNVGGAGDIKLMQV-KGDKTGWITMQKNWGQNWTTGVNLTGQ-GISFRVTTSDGVT-KDFNNVMPNNWGFG 260
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12 Identity = 63/247 (25.51%), Postives = 105/247 (42.51%), Query Frame = 2 Query: 29 LLSVMLLLPALCYSHYTSTYS----RATYYGSPDSLGTPTGACGFGEYGRTVNDANVAGVSR-LWKNGTGCGACYQVRC---KVPQLC-------XXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPD-KSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAGV 721 L + L++ L S + + AT+YG D+ GT GACG+G N A +S L+ +G CG CY + C PQ C + PR + MA P +Y G++ V +++V CW +G ++F + + + + + VAG V +V + + W+ + R +GA + +S G +L F V+ + G T + N +PS W G+ Sbjct: 6 LFATSLVITVLAASGFAPAHGWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQG-GIRFTM---GGFNFFELVLVSNVAGSGSVRSVSV-KGGSTGWITLNRNWGANWQCNSGLVGQ-ALSFAVTSTGGQTLYI-YNVVPSWWSFGM 245
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12 Identity = 64/218 (29.36%), Postives = 104/218 (47.71%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPTGACGFGEYGRTVNDANVAGVS-RLWKNGTGCGACYQVRC-KVPQLC--XXXXXXXXXXXXXXXXKTDFIL--SPRAYGRMALPD--KSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 +RAT+YG T GACG+G+ + A +S L+ G CGACYQ+ C PQ C KT+ + P+ + ++LP K A+ Y GVV V++RR+ C G ++F+ N P++L I V G D+ +++ + D W+ M++ +G + G + F+V+ S G+T NN +P++W G Sbjct: 58 ARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQ-YKAGVVPVKYRRISCARTG-GVKFETKGN---PYFLMILPYNVGGAGDIKLMQV-KGDKTGWITMQKNWGQNWTTGVNLTGQ-GISFRVTTSDGVT-KDFNNVMPNNWGFG 267
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12 Identity = 67/242 (27.69%), Postives = 108/242 (44.63%), Query Frame = 2 Query: 26 YLLSVMLLLPALCYSHYTSTYSRA--TYYGSPDSLGTPTGACGFGEYGRTVNDANVAGVS-RLWKNGTGCGACYQVRCKVPQ-----LCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPD--KSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEG-AISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 YL++V+LL+ L ++ + RA TYYG DS + GACG+ A+ A +S L+++G CG CYQVRC P L + PR + M+ P + A + G+V V +RRV C +G ++F + ++ + I V G V +V + + W+ M R +GA + S G +S + ++ S T++ N +PS W G Sbjct: 7 YLVTVILLVSTLSVGMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRG-GVRFTMRGQG---NFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFL---NVVPSSWWFG 241
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12 Identity = 66/247 (26.72%), Postives = 105/247 (42.51%), Query Frame = 2 Query: 32 LSVMLLLPALCYSHYTS------TYSRATYYGSPDSLGTPTGACGFGE-YGRTVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTDFILS---------PRAYGRMALPD-KSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEG-AISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 L V+L L C S T + AT+YG D+ GT G+CG+G Y A S L+ +G CGACY V C ++ S PR + M+ P ++ +YS G+V V + R PC G ++F + + + +Y + + VAG V A + + EW++M R +G + ++ G A+S R Q +T A + P++W+ G Sbjct: 5 LLVVLFLSLCCASRLRGEAAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVG-GIRFGI---AGHDYYELVLVTNVAGSGAVAAAWV-KGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVT---AYDVAPANWQFG 243 The following BLAST results are available for this feature:
BLAST of CF835127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835127 ID=CF835127; Name=CF835127; organism=Citrus sinensis; type=EST; length=725bpback to top |