CF835229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_SPOFR (40S ribosomal protein S3a OS=Spodoptera frugiperda PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.336e-19 Identity = 48/110 (43.64%), Postives = 73/110 (66.36%), Query Frame = 2 Query: 32 KRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE----DVGVKMERPA--DEPIPEA 343 ++TCYA +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K ERP + P+ E+ Sbjct: 154 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGSGKRGEAGDKSERPEGYEPPVQES 263
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMO (40S ribosomal protein S3a OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.582e-19 Identity = 48/109 (44.04%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 32 KRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPA--DEPIPEA 343 ++TCYA +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K ERP + P+ E+ Sbjct: 154 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKGEAGDKSERPEGYEPPVQES 262
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_CULQU (40S ribosomal protein S3a OS=Culex quinquefasciatus GN=CPIJ008584 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.251e-18 Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 2 Query: 32 KRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 283 ++TCYA SQI+ IR+ M +I+ S DLK +V K + + I ++IEKA +YPL +V+IRKVK+LK P+FDL L+E+HGD Sbjct: 154 RKTCYAQHSQIKAIRKNMTQIITNNVTSSDLKEVVNKLLPDSIAKDIEKACQGVYPLHDVYIRKVKVLKKPRFDLANLLELHGD 237
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_DROGR (40S ribosomal protein S3a OS=Drosophila grimshawi GN=RpS3A PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.641e-18 Identity = 41/84 (48.81%), Postives = 61/84 (72.62%), Query Frame = 2 Query: 32 KRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 283 ++TCYA SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+H D Sbjct: 154 RKTCYAQQSQVRKIRARMTDIITNEVSGVDLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHND 237
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_PODAN (40S ribosomal protein S1 OS=Podospora anserina GN=RPS1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.813e-16 Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 20 PNQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNV 211 PNQ+K+T YA +SQIR IR+KM EI+ +A+SC L+ L K I E+IGREIEKAT IYPLQNV Sbjct: 147 PNQIKKTTYAASSQIRAIRKKMTEIIQREASSCTLQQLTSKLIPEVIGREIEKATQGIYPLQNV 210
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJA (40S ribosomal protein S3a OS=Schistosoma japonicum GN=SJCHGC01275 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.885e-15 Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 17 LPNQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKMERP 319 +P + YA ++I++IR ++ EI+ + ++CDLK +V K I + I ++ KA IYPL FIRKVK+LK PK DL +LME+HG+ S G + RP Sbjct: 147 VPRSERLHSYAQTTRIKRIRARLVEIIQQEVSTCDLKEVVNKLIPDSIAQDARKAASWIYPLGETFIRKVKVLKRPKADLARLMELHGESKSTAPGETVSRP 248
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_TAESO (40S ribosomal protein S3a OS=Taenia solium PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.096e-14 Identity = 37/97 (38.14%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 32 KRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKMERP 319 K YA ++I+++R K+ E++ + A CDLK +V+K I + IG++ SI+PL +RKVK+LK PK DLG+++E+H + +++ G + RP Sbjct: 150 KSHAYAQTTRIKKLRAKIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLGRILELHSEGKADEFGEGVPRP 246
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_TETTH (40S ribosomal protein S3a OS=Tetrahymena thermophila GN=TTHERM_00047480 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 6.016e-13 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 2 Query: 38 TCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 277 TCYA +SQ+R IRRK+ + +AA + + I E ++IEK T +I+PLQN+ IRKVK+LK PK D K+ E++ Sbjct: 159 TCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_DICDI (40S ribosomal protein S3a OS=Dictyostelium discoideum GN=rps3a PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.482e-11 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFI--------------AEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-------SEDVGVKMER 316 +Q K+T YA S+++ IR+KM +I+ +S DLK +V+ I A + +I SI+P+ NVFIRKVK+LK PK D KL E++ +E+VG +ER Sbjct: 147 SQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELYASSATSTIAPTEEVGTAVER 265 The following BLAST results are available for this feature:
BLAST of CF835229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835229 ID=CF835229; Name=CF835229; organism=Citrus sinensis; type=EST; length=568bpback to top |