CF835229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_MACFA (40S ribosomal protein S3a OS=Macaca fascicularis GN=RPS3A PE=2 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 3.400e-24 Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_HUMAN (40S ribosomal protein S3a OS=Homo sapiens GN=RPS3A PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.400e-24 Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_FELCA (40S ribosomal protein S3a (Fragment) OS=Felis catus GN=RPS3A PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.400e-24 Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K+ER Sbjct: 144 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 248
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_BOVIN (40S ribosomal protein S3a OS=Bos taurus GN=RPS3A PE=2 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 3.400e-24 Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_BABBO (40S ribosomal protein S3a OS=Babesia bovis GN=BBOV_III001480 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.441e-24 Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 20 PNQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 301 P Q+K TCY +S+ R +RRKM E+M +A++ ++ +V+K I E IG+EIEKA S++PLQNV IRK+K+LK PKFDL KLMEVH D SE+ G Sbjct: 147 PGQLKSTCYIRSSRTRVVRRKMIEVMQREASTTSMREVVKKIIPESIGKEIEKACKSVFPLQNVLIRKIKVLKKPKFDLTKLMEVHTDISEETG 240
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_AJECH (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain H143) GN=RPS1 PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 4.441e-24 Identity = 60/109 (55.05%), Postives = 81/109 (74.31%), Query Frame = 2 Query: 20 PNQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 343 PNQ+K+T YA +SQIR IR+K+ EI+ +A++ L L K I E+IGREI+K+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 147 PNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIDKSTHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_TETNG (40S ribosomal protein S3a OS=Tetraodon nigroviridis GN=rps3a PE=3 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 7.574e-24 Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKMERP--ADEPIPEA 343 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G K+ER + PI E+ Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKVERADGYEPPIQES 265
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_RAT (40S ribosomal protein S3a OS=Rattus norvegicus GN=Rps3a PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 7.574e-24 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVER 252
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_MOUSE (40S ribosomal protein S3a OS=Mus musculus GN=Rps3a PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 7.574e-24 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVER 252
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_GECJA (40S ribosomal protein S3a OS=Gecko japonicus GN=RPS3A PE=2 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 7.574e-24 Identity = 55/105 (52.38%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG+++EKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDMEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252 The following BLAST results are available for this feature:
BLAST of CF835229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835229 ID=CF835229; Name=CF835229; organism=Citrus sinensis; type=EST; length=568bpback to top |