CF835229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_CANTT (40S ribosomal protein S1 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=RPS1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.574e-24 Identity = 54/97 (55.67%), Postives = 75/97 (77.32%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKM 310 NQ+K+T YA +S++R++R+KM EIM + ++C L L K I E+IGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G K+ Sbjct: 148 NQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_ORYLA (40S ribosomal protein S3a OS=Oryzias latipes GN=rps3a PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 9.893e-24 Identity = 55/107 (51.40%), Postives = 75/107 (70.09%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKMER 316 NQV++T YA Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G K+ER Sbjct: 148 NQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVER 254
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_SOLSE (40S ribosomal protein S3a OS=Solea senegalensis GN=rps3a PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.292e-23 Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGTGTATKATGDDTGAKVER 254
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_LODEL (40S ribosomal protein S1 OS=Lodderomyces elongisporus GN=RPS1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.292e-23 Identity = 52/96 (54.17%), Postives = 73/96 (76.04%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKM 310 NQVK+T YA +S++R++R+KM EI+ + ++ L L K I E+I REIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ SE+ G K+ Sbjct: 135 NQVKKTTYAQSSKLREVRKKMVEILTREVSNSTLSQLTSKLIPEVISREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEASEEKGKKV 230
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_CRYNE (40S ribosomal protein S1 OS=Cryptococcus neoformans GN=RPS1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.292e-23 Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKMERPADEPIPE 340 NQVK+T YA +SQ+++IR KM EIM +A DLK LV+KF+ E IGREIEKA IYPL NV++RK KI+K PK D+ KL+E HG+ + + G K+ + + PE Sbjct: 148 NQVKKTTYAQSSQLKEIRAKMVEIMRREAEGSDLKELVQKFVPESIGREIEKAAKGIYPLHNVYVRKAKIVKTPKIDMSKLLESHGEAMDANTGSKVVKSGEFVEPE 254
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_COCP7 (40S ribosomal protein S1 OS=Coccidioides posadasii (strain C735) GN=RPS1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.292e-23 Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 2 Query: 26 QVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 343 QVK+T YA +SQIR IR+KM EI+ +A+S L L K + E+IGREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 149 QVKKTTYARSSQIRAIRKKMVEIIQREASSRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGEASTDDKGQKVEREFTEQVLES 254
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_COCIM (40S ribosomal protein S1 OS=Coccidioides immitis GN=RPS1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.292e-23 Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 2 Query: 26 QVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 343 QVK+T YA +SQIR IR+KM EI+ +A+S L L K + E+IGREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 149 QVKKTTYARSSQIRAIRKKMVEIIQREASSRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGEASTDDKGQKVEREFTEQVLES 254
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_XENTR (40S ribosomal protein S3a OS=Xenopus tropicalis GN=rps3a PE=2 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 1.687e-23 Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVER 252
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_TAEGU (40S ribosomal protein S3a OS=Taeniopygia guttata GN=RPS3A PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.687e-23 Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGTKVER 252
BLAST of CF835229 vs. ExPASy Swiss-Prot
Match: RS3A_EIMTE (40S ribosomal protein S3a OS=Eimeria tenella PE=2 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 2.204e-23 Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 23 NQVKRTCYAPASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKMER 316 NQ+++T YA Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G K+ER Sbjct: 148 NQIRKTSYAQHQQVRQIRKKMMEIMTGEFQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVER 252 The following BLAST results are available for this feature:
BLAST of CF835229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835229 ID=CF835229; Name=CF835229; organism=Citrus sinensis; type=EST; length=568bpback to top |