CF835232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC10_ORYSJ (Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17 Identity = 49/132 (37.12%), Postives = 69/132 (52.27%), Query Frame = -3 Query: 149 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 541 PP N N + G+ V +L N +V+V+LQ+ + + +E+HP HLHG DF+V+G+G G + V P G W A+RF ADNPG W HCH+E H G+ + V G +P Q L Sbjct: 443 PPNNTNVSNGTRVVVLPYNASVEVVLQDTSILG---AESHPLHLHGFDFFVVGQGTGNYDPSKHPAEFNLVDPVQRNTVGVPAGGWVAIRFFADNPGVWFMHCHLEVHTTWGLKMA---WVVNDGPLPEQKL 568
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC13_ARATH (Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.440e-17 Identity = 45/109 (41.28%), Postives = 61/109 (55.96%), Query Frame = -3 Query: 197 TLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKE-DEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 520 T G+ Y L N+ V +ILQ+ + + +E HP HLHG++F+V+G G G F D NT P GW A+RFVA+NPGAW HCHI+ H G+ +V Sbjct: 441 TRGTKAYKLKFNSQVQIILQDTSIVT---TENHPMHLHGYEFYVVGTGVGNFNPNTDTSSFNLIDPPRRNTIGTPPGGWVAIRFVANNPGAWLMHCHIDSHIFWGLAMV 546
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC14_ARATH (Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17 Identity = 46/110 (41.82%), Postives = 61/110 (55.45%), Query Frame = -3 Query: 197 TTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 523 T G+ V +L N++V++ILQ N+ HP HLHG++F+V+G G G F + + T V P GWTA+RFVA+NPG W HCHIE H GM V Sbjct: 440 TRFGTKVVVLDYNSSVELILQGTTVWASNI---HPIHLHGYNFYVVGSGFGNFDRRKDPLRYNLVDPPEETTVGVPRNGWTAVRFVANNPGVWLLHCHIERHATWGMNTV 546
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC11_ARATH (Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17 Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = -3 Query: 206 PPENFWNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 580 PP+ F Y + N T+ G+ + + NTT++++LQ+ N + E+HP+HLHG++F+V+G G G F K+D NT + GW A+RF ADNPG W HCH+E H G+ Sbjct: 411 PPKAF--NYTGVPLTANLGTSTGTRLSRVKFNTTIELVLQDTNLLTV---ESHPFHLHGYNFFVVGTGVGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGL 531
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC3_ARATH (Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.161e-17 Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = -3 Query: 197 GSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 514 G+ Y L + V ++LQ+ + + P E HP HLHG+ F+V+G G G F + D NT P GW A+RFVADNPGAW HCHI+ H G+ +V Sbjct: 444 GTKAYKLKYKSNVQIVLQDTSIVTP---ENHPMHLHGYQFYVVGSGFGNFNPRTDPARFNLFDPPERNTIGTPPGGWVAIRFVADNPGAWFMHCHIDSHLGWGLAMV 547
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.161e-17 Identity = 49/131 (37.40%), Postives = 67/131 (51.15%), Query Frame = -3 Query: 149 PVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 538 P N T G+ VY L N +V V+LQ+ I P E+HP HLHG +F+V+G+G G + + P G WTA+RF +DNPG W HCH E H G+ +A V+ G P++ L Sbjct: 430 PKNLQTMNGTRVYRLPYNASVQVVLQDTGIISP---ESHPIHLHGFNFFVVGKGVGNYNPRTSPSTFNLIDPIERNTIGVPTGGWTAIRFRSDNPGVWFMHCHFE--VHTSWGLKMAFVVDN-GKRPSETL 554
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC4_ORYSJ (Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -3 Query: 149 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 541 PP N N G+ + +L NT+V++++Q+ + + E+HP HLHG +F+V+G+G G + ++ V P G W A+RF+ADNPG W HCH+E H G+ + + G+ PNQ L Sbjct: 444 PPNNTNVKTGTKLLVLRYNTSVELVMQDTSILG---IESHPLHLHGFNFFVIGQGFGNYDAVNDPAKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV---LDGSHPNQKL 569
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC12_ARATH (Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17 Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = -3 Query: 200 GSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 514 G+ +Y L + V V+LQ+ N + SE HP HLHG+DF+++G G G F K+D NT + GW +RFVADNPG W HCH++ H G+ + Sbjct: 439 GTKLYKLKYGSRVQVVLQDTNIVT---SENHPIHLHGYDFYIVGEGFGNFNPKKDTSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVWLMHCHLDVHIKWGLAM 541
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC9_ARATH (Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.211e-16 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = -3 Query: 206 SGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTK-EDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 511 + V + N+TV+++LQN + P E+HP HLHG +F+VLG G G + D NT + P GW LRF+A+NPG W FHCH++ H +G+ Sbjct: 443 TSVKTIRFNSTVEIVLQNTGILTP---ESHPMHLHGFNFYVLGYGFGNYDPIRDARKLNLFNPQMHNTVGVPPGGWVVLRFIANNPGIWLFHCHMDAHLPLGI 542
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC4_ARATH (Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.211e-16 Identity = 49/129 (37.98%), Postives = 65/129 (50.39%), Query Frame = -3 Query: 149 NANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 532 N T G+ +Y L N TV ++LQ+ I P E HP HLHG +F+ +GRG G F + + P G W +RF ADNPG W HCH+E H G+ +A VE G PNQ++ Sbjct: 426 NMATETGTRLYKLPYNATVQLVLQDTGVIAP---ENHPVHLHGFNFFEVGRGLGNFNSTKDPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLE--VHTTWGLKMAFLVEN-GKGPNQSI 548 The following BLAST results are available for this feature:
BLAST of CF835232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835232 ID=CF835232; Name=CF835232; organism=Citrus sinensis; type=EST; length=582bpback to top |