CF835232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC6_ORYSJ (Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.087e-15 Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = -3 Query: 197 PVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKE--DEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 538 P+ + + + V L N TV+++LQN + E+HP HLHG +F+V+ +G G E NT + GW +RFVADNPG WA HCHI+ HF IG+ +V Sbjct: 445 PLASTGSPSTKVKTLRYNATVEMVLQNTALVG---LESHPMHLHGFNFFVVAQGFGNNDGEAAGAGEFNLVNPQERNTVAVPTGGWAVIRFVADNPGMWAMHCHIDSHFAIGLAMV 557
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC9_ORYSJ (Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.644e-15 Identity = 46/121 (38.02%), Postives = 58/121 (47.93%), Query Frame = -3 Query: 197 PPVNAN-----TTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 541 PPVN T G+ V +L T V+V+ + + SE HP HLHG F+V+GRG G F + + V P GW A+RF ADNPG W HCH + H GM V Sbjct: 442 PPVNNGSGPLMTKRGTKVKVLEYGTVVEVVFHDLS------SENHPMHLHGFAFYVVGRGNGTFDESRDPATYNLVDPPFQNTVSVPRSGWAAIRFRADNPGVWFMHCHFDRHVVWGMDTV 556
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.644e-15 Identity = 40/106 (37.74%), Postives = 52/106 (49.06%), Query Frame = -3 Query: 200 GSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHIGMGV 514 G+ VY L + V V+LQ N E HP HLHG+DF++L G G F + V P GW +RFVADNPG W HCH++ H G+ + Sbjct: 441 GTKVYKLKYGSAVQVVLQGTNIFA---GENHPIHLHGYDFYILAEGLGNFDAGADTAKFNMEDPPMRNTVGVPVNGWAVIRFVADNPGVWLMHCHLDVHITWGLAM 543
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC17_ORYSJ (Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.644e-15 Identity = 40/106 (37.74%), Postives = 52/106 (49.06%), Query Frame = -3 Query: 200 GSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHIGMGV 514 G+ VY L + V V+LQ N E HP HLHG+DF++L G G F + V P GW +RFVADNPG W HCH++ H G+ + Sbjct: 441 GTKVYKLKYGSAVQVVLQGTNIFA---GENHPIHLHGYDFYILAEGLGNFDAGADTGKFNVEDPPMRNTVGVPVNGWAVIRFVADNPGVWLMHCHLDVHITWGLAM 543
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSJ (Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = -3 Query: 149 NTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 487 NT+V++I Q++ + +S+++P HLHG+D ++L +G G F + + ++ P G W A+RF+ DNPG W HCH E FHI MG+ A VE G P +L Sbjct: 460 NTSVEIIFQSSTLL---MSDSNPMHLHGYDVFLLAQGLGSFNAKRDIRKFNYHNPQLRNTILVPRGGWAAVRFITDNPGMWYLHCHFE--FHIIMGMATAFIVED-GPTPETSL 567
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSI (Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = -3 Query: 149 NTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 487 NT+V++I Q++ + +S+++P HLHG+D ++L +G G F + + ++ P G W A+RF+ DNPG W HCH E FHI MG+ A VE G P +L Sbjct: 460 NTSVEIIFQSSTLL---MSDSNPMHLHGYDVFLLAQGLGSFNAKRDIRKFNYHNPQLRNTILVPRGGWAAVRFITDNPGMWYLHCHFE--FHIIMGMATAFIVED-GPTPETSL 567
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC15_ORYSJ (Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = -3 Query: 197 TVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 481 TVDV+ Q+ ++ +++P HLHGHD ++L +G G + DE NT ++ GW A+RFVADNPGAW HCH E H +GM V Sbjct: 487 TVDVVFQSTAMLQ---GDSNPMHLHGHDVFLLAQGIGIYDAARDEGKFNLVNPPRKNTVLVPNLGWAAVRFVADNPGAWLMHCHFEFHLSMGMAAV 579
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC8_ORYSJ (Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.133e-14 Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = -3 Query: 197 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 541 PP + V + N V+V+LQ+ +E HP HLHG DF++L +G G+F + NT + GW +RF+A+NPG W HCH++ H +G+ +V Sbjct: 416 PPPMQGFRKATAVKKVKYNDVVEVVLQSEQYSSTLGTENHPIHLHGFDFYLLAQGLGRFNPSMKSKYNLVDPQVRNTVAVPAGGWAVIRFMANNPGMWFMHCHLDAHLPLGLAMV 530
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSJ (Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.525e-14 Identity = 46/114 (40.35%), Postives = 63/114 (55.26%), Query Frame = -3 Query: 149 NTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 487 NT+V++I Q+ ++ S+++P HLHG+D ++L +G G F K D NT + GW A+RFV DNPG W HCH E FHI MG+ A VE G P +L Sbjct: 465 NTSVEIIFQSTTLMQ---SDSNPMHLHGYDVFLLAQGLGNFNAKRDVRKFNYHNPQLRNTVQVPRGGWAAIRFVTDNPGMWYLHCHFE--FHIIMGMATAFIVED-GPTPETSL 572
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSI (Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.525e-14 Identity = 46/114 (40.35%), Postives = 63/114 (55.26%), Query Frame = -3 Query: 149 NTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 487 NT+V++I Q+ ++ S+++P HLHG+D ++L +G G F K D NT + GW A+RFV DNPG W HCH E FHI MG+ A VE G P +L Sbjct: 465 NTSVEIIFQSTTLMQ---SDSNPMHLHGYDVFLLAQGLGNFNAKRDVRKFNYHNPQLRNTVQVPRGGWAAIRFVTDNPGMWYLHCHFE--FHIIMGMATAFIVED-GPTPETSL 572 The following BLAST results are available for this feature:
BLAST of CF835232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835232 ID=CF835232; Name=CF835232; organism=Citrus sinensis; type=EST; length=582bpback to top |