CF835317

Overview
NameCF835317
Unique NameCF835317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9291 contig Csv1_Contig9291:524..1372. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 3.077e-80
Identity = 159/242 (65.70%), Postives = 178/242 (73.55%), Query Frame = -2
Query:  159 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFA------------PVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 848
            MMY QGCFAGGTVLR+AKD+AENNKGARVLVVCSEIT VTFRGP++THLDSLVGQALF           DP    E P ++L  +   ILPDSDGAIDGHLREVGLTFHL+KDVPG+ISKNI K L++AF             P  ++D   IFWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFI+D MR+ SA+    TTGEGLDWGVL GFGPGLTVETV+L S+
Sbjct:  164 MMYQQGCFAGGTVLRVAKDVAENNKGARVLVVCSEITCVTFRGPSETHLDSLVGQALFGDGAAAVILGSDP-LPEENPCFELHWSGSNILPDSDGAIDGHLREVGLTFHLMKDVPGIISKNIGKVLNDAFRSAFDESGNAEDRPASVND---IFWIAHPGGPAILDQVEEKMKLAPEKMRATRDVLSEYGNMSSACVLFIMDHMRRMSAQNKLQTTGEGLDWGVLLGFGPGLTVETVLLKSI 401          
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: 2PS_GERHY (2-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.527e-79
Identity = 146/234 (62.39%), Postives = 179/234 (76.50%), Query Frame = -2
Query:  147 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 848
            M+Y QGC AGGTVLRLAKDLAENNKG+RVL+VCSEITA+ F GP + HLDSLV QALF            P  +VERP++++VST QTILPD++ A+  HLRE GLTF L +DVP +++KNIE +  +A +P+GI+DWNS+FW+ HPGG AILDQV           +A+R VLSEYGN+ SACVLFI+DE+RK+S  E K+TTGEGLD GVLFGFGPG+TVETVVL SV + A
Sbjct:  163 MLYQQGCAAGGTVLRLAKDLAENNKGSRVLIVCSEITAILFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAVERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVRVTA 396          
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 1.867e-77
Identity = 146/232 (62.93%), Postives = 168/232 (72.41%), Query Frame = -2
Query:  153 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            MMY  GC+ GGTVLRLAKDLAENNKGAR LVVCSEITA+TF  P+DT LD LVGQALF           DP+  VE+PL++LVS +QT++PD    I G   +VGLTFHL KDVP L+S+NIEKSL E F P+GI DWNSIFW+ H GG  ILDQV             TR V+SEYGNM+SACVLF+LDEMRK S +E   T  EGL+WGVL  FGPGLT+ET+VLHSV I
Sbjct:  158 MMYQLGCYGGGTVLRLAKDLAENNKGARALVVCSEITAITFHAPSDTDLDVLVGQALFGDGAASVIIGSDPNLEVEKPLFELVSAAQTLVPDCGHKIYGKTSDVGLTFHLHKDVPRLVSQNIEKSLVEVFQPLGIFDWNSIFWVGHAGGREILDQVELKLGLKPEKLNVTRHVMSEYGNMASACVLFVLDEMRKTSTKEGFGTNVEGLEWGVLCSFGPGLTIETIVLHSVSI 389          
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: DPS2_PINST (Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.265e-77
Identity = 149/230 (64.78%), Postives = 170/230 (73.91%), Query Frame = -2
Query:  156 MYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 845
            ++  GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG ALF           DP   VE+P +++V T+QT++P+SDGAI G LREVGLTF L   VP LIS NIEK L EAF+   ISDWN +FWIAHPGG AILDQV           +ATR V+SEYGNMSSACV FILDE RK S +   +T+G G   GVLFGFGPGLTVETVVL S+P
Sbjct:  165 VFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLALFGDGAAALIVGADPIPQVEKPCFEIVWTAQTVVPNSDGAISGKLREVGLTFQLKGAVPDLISTNIEKCLVEAFSQFNISDWNQLFWIAHPGGRAILDQVEASLNLDPTKLRATRHVMSEYGNMSSACVHFILDETRKASRQNGCSTSGGGFQMGVLFGFGPGLTVETVVLKSIP 394          
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: DPS1_PINST (Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.265e-77
Identity = 149/230 (64.78%), Postives = 170/230 (73.91%), Query Frame = -2
Query:  156 MYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 845
            ++  GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG ALF           DP   VE+P +++V T+QT++P+SDGAI G LREVGLTF L   VP LIS NIEK L EAF+   ISDWN +FWIAHPGG AILDQV           +ATR V+SEYGNMSSACV FILDE RK S +   +T+G G   GVLFGFGPGLTVETVVL S+P
Sbjct:  165 VFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLALFGDGASALIVGADPIPQVEKPCFEIVWTAQTVVPNSDGAISGKLREVGLTFQLKGAVPDLISTNIEKCLVEAFSQFNISDWNQLFWIAHPGGHAILDQVEASLNLDPTKLRATRHVMSEYGNMSSACVHFILDETRKASRQNGCSTSGGGFQMGVLFGFGPGLTVETVVLKSIP 394          
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 1.210e-76
Identity = 147/235 (62.55%), Postives = 175/235 (74.47%), Query Frame = -2
Query:  153 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPA--DT-HLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            MMY QGC+ GGT LRLAKDLAENNKGARVLVVC EIT ++F+ P+  DT  LD LVGQALF           DP  ++E+PL++LV  +QT++PDS   I  +L E GL  HLLKD P +IS+NIE+ L E F P+GISDWNSIFW+AHPGGPAIL+Q+           +A R VLSEYGNMSSACVLF+LDEMRK + E+   TTGEGL+WG+LFGFGPGLT+ETVVLHSV I
Sbjct:  158 MMYQQGCYGGGTALRLAKDLAENNKGARVLVVCVEITVMSFQAPSRNDTDELDVLVGQALFADGASAVIIGSDPILAIEKPLFELVFATQTLIPDSGHVICANLTEAGLIPHLLKDAPIVISQNIERRLVEVFKPLGISDWNSIFWVAHPGGPAILNQIELKLGLKPEKLRAARHVLSEYGNMSSACVLFVLDEMRKGTIEKGMGTTGEGLEWGLLFGFGPGLTIETVVLHSVSI 392          
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSB_PETHY (Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.210e-76
Identity = 141/232 (60.78%), Postives = 174/232 (75.00%), Query Frame = -2
Query:  153 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            MMY QGCFAGGT+LRLAKDLAENNKGARVLVVC+E +A+ FRGP++ ++D+L+ QALF           DP   +ERP++++ S +QT +P+ D  +  HLRE+GLTFH  KDVP  I+KN+E  L +AF P+GISDWNS+FWI HPGG AI+DQV           +ATR +LSEYGN+SSAC LFILDE+RKKSA E   T+G+GLD GVL  FGPGLT+ETVVL SVPI
Sbjct:  161 MMYQQGCFAGGTMLRLAKDLAENNKGARVLVVCAESSAIGFRGPSEANVDNLIAQALFGDGAAALIIGSDPKPGLERPVFEIFSAAQTFVPNGDCHLALHLREMGLTFHCTKDVPPTIAKNVESCLIKAFEPLGISDWNSLFWILHPGGNAIVDQVESTLGLGPEKLRATRNILSEYGNLSSACCLFILDEIRKKSAREGMRTSGDGLDLGVLLSFGPGLTIETVVLRSVPI 392          
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.024e-75
Identity = 147/233 (63.09%), Postives = 167/233 (71.67%), Query Frame = -2
Query:  153 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            M+Y QGCFAGGT LRLAK LAE+ KGARVLVVC+E T V FR P++ H D LV QALF           DPD +  ER  + +VSTSQ +LPDS GAI GH+ E GL   L +DVP ++SKN+ K L EAF P GISDWNSIFW+ HPGG AILDQV             +R VL+EYGNMSS CV F LDEMRK+SA E KATTGEGL+WGVLFGFGPGLTVETVVL SVP+
Sbjct:  158 MLYQQGCFAGGTTLRLAKCLAESRKGARVLVVCAETTTVLFRAPSEEHQDDLVTQALFADGASAVIVGADPDEAADERASFVIVSTSQVLLPDSAGAIGGHVSEGGLLATLHRDVPQIVSKNVGKCLEEAFTPFGISDWNSIFWVPHPGGRAILDQVEERVGLKPEKLSVSRHVLAEYGNMSSVCVHFALDEMRKRSANEGKATTGEGLEWGVLFGFGPGLTVETVVLRSVPL 390          
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: DPSS_PINSY (Dihydropinosylvin synthase OS=Pinus sylvestris PE=1 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.338e-75
Identity = 143/232 (61.64%), Postives = 172/232 (74.14%), Query Frame = -2
Query:  150 MYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 845
            ++  GCFAGGTVLR+AKDLAENN+GARVLV+CSE TAVTFRGP++THLDSLVGQALF           DP   VE+  +++V T+QT++P+S+GAI G +REVGLTF L   VP LIS NIE  + EAF+   ISDWN +FW+ HPGG AILD+V             TR V+SEYGNMSSACV FILD+ RK S +   +TTGEGL+ GVLFGFGPGLT+ETVVL SVPI+
Sbjct:  162 VFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPIQ 393          
BLAST of CF835317 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.084e-72
Identity = 133/232 (57.33%), Postives = 172/232 (74.14%), Query Frame = -2
Query:  153 MMYXQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            MMY QGC AG  +LRLAKDLAE+NKG RVLVVC+EIT   FRGP+    D+L+ Q LF           DP   +E PL++LVS++QTI+P++D  +  HLRE+GLTFH  K VP ++++N+E  L +AF P GISDWNSIFW+ HPGG AI+D+V           +A+R VLSEYGN++SACVLFILDEMRKKS ++ + TTGEGL+WGV+FGFGPGLT++T+++ SVPI
Sbjct:  164 MMYQQGCNAGAAMLRLAKDLAESNKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCLFGDGAAAMIVAADPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSKAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGPEKLRASRDVLSEYGNLTSACVLFILDEMRKKSKKDEQMTTGEGLEWGVVFGFGPGLTIDTIIIRSVPI 395          
The following BLAST results are available for this feature:
BLAST of CF835317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
CHSY_EQUAR3.077e-8065.70Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
2PS_GERHY1.527e-7962.392-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 S... [more]
CHSF_PETHY1.867e-7762.93Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
DPS2_PINST9.265e-7764.78Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=... [more]
DPS1_PINST9.265e-7764.78Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=... [more]
CHSG_PETHY1.210e-7662.55Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]
CHSB_PETHY1.210e-7660.78Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=... [more]
BBS_PHASS1.024e-7563.09Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]
DPSS_PINSY1.338e-7561.64Dihydropinosylvin synthase OS=Pinus sylvestris PE=... [more]
CHSB_IPOPU3.084e-7257.33Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01A15_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835317 ID=CF835317; Name=CF835317; organism=Citrus sinensis; type=EST; length=849bp
TTTTGACGTCATCAGTGAAAAGGTACGATGCCTTAAATTCAATTGACAAA
ACTAAACCTTCACACGATCAACCAATAATTCAAGAGTGAAAGCATACAAC
ATAAAGTTACTGAACTACTAAACATACTGATGGAGTTCTCACTTCAAGCT
TTGATGGGGACACTGTGCAGCACAACGGTCTCGACGGTGAGCCCCGGCCC
GAACCCGAACAGCACACCCCAATCTAGCCCTTCGCCGGTGGTGGCTTTCG
CTTCCTCAGCAGACTTCTTTCTCATCTCGTCAAGGATGAACAGGACACAA
GCGCTTGACATGTTACCGTACTCACTCAACACTTGACGTGTGGCCTTCAG
CTTCTCCTCTTTGAGGCCGAGTTTAGACTCCACTTGGTCCAGAATTGCGG
GCCCACCGGGGTGAGCGATCCAGAATATCGAGTTCCAGTCGCTGATGCCA
ACCGGGGCGAACGCTTCCGACAGGCTTTTCTCTATATTCTTTGAGATCAA
GCCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCGCAAGT
GTCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAGTCGAC
ACAAGCTGATACAACGGACGCTCGACCGACGTGTCAGGATCGGCACCCAC
GATCACAGCAGCAGCACCATCACCGAACAAAGCCTGGCCCACAAGAGAAT
CAAGATGAGTATCGGCAGGGCCGCGGAAAGTGACCGCCGTGATCTCCGAA
CAGACAACAAGAACGCGAGCGCCCTTGTTGTTCTCAGCCAAGTCTTTAGC
GAGGCGAAGAACAGTGCCGCCGGCGAAACATCCTTGNTGGTACATCATG
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