CF835329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28 Identity = 74/181 (40.88%), Postives = 111/181 (61.33%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS-SSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEEN---ERLRQQVAEVSNA 730 M R +Q+++I+N RQVTFSKRR G+ KKA E+SVLCDADVALI+FS GKL+E+SS SSM+ ILE+++ +S + V +P+ E Q + Y +L + RQ+ GE++ L+++ELQ+LE LE L + +ELQ++ K L +N ++L + E +NA Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNA 181
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28 Identity = 74/181 (40.88%), Postives = 111/181 (61.33%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS-SSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEEN---ERLRQQVAEVSNA 730 M R +Q+++I+N RQVTFSKRR G+ KKA E+SVLCDADVALI+FS GKL+E+SS SSM+ ILE+++ +S + V +P+ E Q + Y +L + RQ+ GE++ L+++ELQ+LE LE L + +ELQ++ K L +N ++L + E +NA Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNA 181
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28 Identity = 68/170 (40.00%), Postives = 102/170 (60.00%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQ 709 M R KI IK+IDN RQVTFSKRR G+ KKA EL++LCDADV LI+FS TG+L+++SSSSMK I+E+++ + R+ P E + + + L ++ H RQ+ GEEI ++ +LQ L+ +E+ L + +L +G L+ +EN LR++ Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPMSEAKFWQ-REVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKK 169
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.140e-28 Identity = 66/156 (42.31%), Postives = 99/156 (63.46%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRR 667 M R KI+IK+IDNAT+RQVTFSKRR G+FKKA ELS+LCDA+V L++FS+T +L++++SSSMK I+E++ ++ + S E +L + S L ++ RQ+ G+++ GL +E+LQ LE LE+ L + EL R+ Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMNASSEAKLWQQEAAS-LRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 8.140e-28 Identity = 72/174 (41.38%), Postives = 106/174 (60.92%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS-MKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R K+Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VALIIFS GKL+EY++ S M +ILE++ +S + + + Q + Y L + + + GE++ L+L+ELQ+LE+ LE L + NELQR+ K L EEN+ L++++ E Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVE 174
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.813e-27 Identity = 69/172 (40.12%), Postives = 111/172 (64.53%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNY--SMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQ 709 M R K Q+K+I+NAT+RQVTFSKRR G+ KKA ELSVLCDA+V+LIIFS GKL+E++SS+M++ ++++ H+K +RV V + +++ Y + + K+ + R++ GE I S+EELQ++E+ LE + + +L+++ K L ENE+L ++ Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTK--DRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK 170
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.813e-27 Identity = 71/174 (40.80%), Postives = 106/174 (60.92%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS-MKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R K+Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VALIIFS GKL++Y++ S M +ILE++ +S + + + Q + Y L + + + GE++ L+L+ELQ+LE+ LE L + NELQR+ K L EEN+ L++++ E Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVE 174
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.368e-27 Identity = 68/176 (38.64%), Postives = 112/176 (63.64%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFK-EAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEVS 724 M R KI I++IDN+T+RQVTFSKRR G+ KKA+ELS+LCDA+V L++FS+TG+L+E+SS++MK +++++ + L + S E+++ + S+ + ++SH +Q+ GEE+ GL + +LQ LE LE+ L + EL +G L+ +EN L + + +S Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTNAKEELLGGNATS-EIKIWQREAASLRQQLHNLQESH--KQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMS 173
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.368e-27 Identity = 68/174 (39.08%), Postives = 105/174 (60.34%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEV 721 M R KI I+KID++T+RQVTFSKRR+G+ KKA+EL++LCDA+V LIIFS T KL++++SSS+K +E+ + + P+ E++ + L +E RQ+ G E++GLS++ELQ +E LE+ L + EL R+ L+ EN L ++V + Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQELMNPASEVKFWQ-REAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRI 173
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.040e-27 Identity = 72/175 (41.14%), Postives = 109/175 (62.29%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVH-SKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEV 721 M R KI+IK+I+NA +RQVTFSKRR G+ KKA ELSVLCDA+VA+I+FS +GKLFEYSS+ MK+ L ++ H S + + ++ E+ +L++ + ++ HL Q++G+ ++ L+ +ELQ LE+ L L V E + + + ENE LR+QV E+ Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRYGNHQSSSASKAEEDCAEVDILKDQLSKL------QEKHL--QLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQVQEL 167 The following BLAST results are available for this feature:
BLAST of CF835329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835329 ID=CF835329; Name=CF835329; organism=Citrus sinensis; type=EST; length=732bpback to top |