CF835329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.783e-20 Identity = 61/174 (35.06%), Postives = 102/174 (58.62%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEV 721 M R KI+IK+I+N++ RQVT+SKRR GI KKA+E+SVLCDA V++IIF+++GK+ E+ S S + H + +R+ P E +N + + KE LR ++GE+I L+ +EL LE +LE G + +++ +++ EEN+ L+ ++ ++ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGKRLWDPKHEHL---DNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSAL----KNKQMEFVRMMRKHNEMVEEENQSLQFKLRQM 167
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 8.159e-20 Identity = 62/179 (34.64%), Postives = 105/179 (58.66%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS-MKEILEKHRVHSKNLERVDQP-SVELQLLENNNYSMLFKEAAEKSHLLRQMR---GEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEV 721 M R K+ +++I+N +RQVTF+KRR G+ KKA ELS+LCDA+VAL++FS G+L+++SSSS M + LE+++ + + P S E+Q NNY A L + R GE++ L+ EL++LE + L ++ +L+R+ ++L + N L++++ E+ Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQ----NNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEI 175
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 50/138 (36.23%), Postives = 85/138 (61.59%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRV 613 M R ++++KKI+N T RQVTFSKRR G+ KKA EL++LCDA + +I+FS TGK++EYSS + R R ++ V+ ++++ + + E ++RQ G+++ L+L+++ LE+ +E L +V Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAPSTRFEEMDVQQRIIQ--EMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKV 136
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.374e-19 Identity = 57/175 (32.57%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS-SSMKEILEKHRV-HSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R+K++IK+I+N ++RQVTFSKRR G+ +KA +LS+LC++ +A+++ S +GKL++ +S +M +I++++ + H+ LE +D L E + KE E + ++ + S++ L LE LE L LQ+ LL EEN+ L QV + Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYEIHHADELEALD-------LAEKTRNYLPLKELLE--IVQSKLEESNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTLASQVGK 166
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19 Identity = 57/177 (32.20%), Postives = 100/177 (56.50%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS--MKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLS-LEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEV 721 M + KI++K+I++AT RQVTFSKRR G KKA EL+VLCDA V +++FS GKLF++ S + E+ ++ + ++N + + Q++ + L E + LR+ GE++ +S ++EL +L+ LE L +V +++R + + E+N L + V ++ Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNRDDEQMV--MEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLCRMVTKI 175
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19 Identity = 62/173 (35.84%), Postives = 102/173 (58.96%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS--MKEILEKHRVHSKNL---ERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLR 703 M R KI+IK+I+N++ RQVT+SKRR GI KKA+E++VLCDA V+LIIF +GK+ EY S S + ++L+ ++ S + + S E+ ++ N +M K LR ++GE+I+ L+ +EL LE L GL + +++ ++L EE+++L+ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVK--------LRHLKGEDINSLNHKELMVLEEGLTNGLSSI----SAKQSEILRMVRKNDQILEEEHKQLQ 161
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19 Identity = 58/174 (33.33%), Postives = 100/174 (57.47%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS-SMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R K+Q+++I+N RQVTF KRR G+ KKA ELSVLCDADV +IIFS+ GKL E +++ +M ++E+++ + +++ +++ Q + +L +E LR G ++L++L LE+ LE+ + ++ L+ + +L E NE L+++V E Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAG-GQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKE 173
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19 Identity = 55/134 (41.04%), Postives = 88/134 (65.67%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS--SSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLE 595 MAR KIQIK+I+N T RQVT+SKRR G+FKKA EL+VLCDA V++I+FS++ KL EY S ++ KEI++ + + + VD + + + ++ +L ++ ++Q GE + L ++EL++LE +E Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLY----QTISDVDVWATQYERMQETKRKLLETNRNLRTQ-IKQRLGECLDELDIQELRRLEDEME 129
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 57/142 (40.14%), Postives = 89/142 (62.68%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHL-------LRQMRGEEIHGLSLEELQKLERSLEVGL 604 MAR KIQIK+I+N T RQVT+SKRR G+FKKA EL+VLCDA V++I+ S+TGKL E+ S S + +K L + Q +V + L N++Y + ++ + + +RQ GE ++ L+ E+L++L +++ L Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPS---------ITTKQLFDLYQKTVGVDLW-NSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSL 132
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 62/181 (34.25%), Postives = 105/181 (58.01%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS-SMKEILEKHRVHSKNL------ERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIH-GLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 MAR K+Q+++I+N RQVTF KRR G+ KKA ELS+LC+AD+ +IIFSA GKL++ +++ +M+E++E+++ S +R+D P E +L+ ++L K LR + G + +++EEL LER LE+ + + L+ + +L NE L++++ E Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMD-PKQEAMVLK-QEINLLQKG-------LRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172 The following BLAST results are available for this feature:
BLAST of CF835329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835329 ID=CF835329; Name=CF835329; organism=Citrus sinensis; type=EST; length=732bpback to top |