CF835363

Overview
NameCF835363
Unique NameCF835363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:43..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.274e-39
Identity = 84/178 (47.19%), Postives = 117/178 (65.73%), Query Frame = 3
Query:  222 EHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLR----RKLRLPKDADQ--APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            + D RF IFK NLR    H + + +AT+  G+T F++LT  E+R  YLG R    R++   K+ +   +  +  +++P   DWR+KGAV  +KDQG+CGSCW+FST  A+EG N + TG+LVSLSEQ+LVDCD         S + GCNGGLM+ AF++ +K GGL  E+DYPY GT+
Sbjct:   24 QQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTN 193          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.081e-38
Identity = 83/171 (48.54%), Postives = 107/171 (62.57%), Query Frame = 3
Query:  222 EHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            E D RF IFK NLR    H + + S   G+T+F+DLT  E+R  YLG + + +  +           D LP   DWR+KGAV  VKDQG CGSCW+FST GA+EG N + TG L++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  ++DYPY G D
Sbjct:   68 EKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVD 230          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.411e-38
Identity = 89/183 (48.63%), Postives = 115/183 (62.84%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQK-LDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            FK K+ K Y   E+ + RF IFK+N+ +A  +Q  +  SA +G+T +SDLT  EF RT+L       +P      P       N++P +FDWREKGAV  VK+QG CGSCW+FSTTG +E   F  TGKL+SLSEQQLVDCD           D GCNGGL ++A+E  +K GGLM E++YPY
Sbjct:   23 FKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHL--TASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPY 193          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.843e-38
Identity = 84/186 (45.16%), Postives = 114/186 (61.29%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL-RLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 722
            F  +   F KAY + EE   RF +FK NL+      K   S   G+ +F+DL+  EF++ YLGL+  + R  ++   A         +P   DWR+KGAV  VK+QGSCGSCW+FST  A+EG N + TG L +LSEQ+L+DCD         + ++GCNGGLM+ AFEY +K GGL +EEDYPY+
Sbjct:   51 FENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCD--------TTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYS 228          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.004e-38
Identity = 85/183 (46.45%), Postives = 114/183 (62.30%), Query Frame = 3
Query:  201 KAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP--ILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 737
            K Y    E + RF IFK NL+    H  + D +   G+T+F+DLT  EFR  YL  R+K+   KD+ +    +    D LP + DWR  GAV  VKDQG+CGSCW+FS  GA+EG N + TG+L+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+ +K GG+  ++DYPY   D G
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYL--RKKMERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLG 226          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.011e-36
Identity = 100/229 (43.67%), Postives = 120/229 (52.40%), Query Frame = 3
Query:   75 DVDQMIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            D    I+ V+D   E+    E T   +LG   H   FS F  ++ K Y S EE   RF++FK NL       K   S    + QF+DLT  EF+R  LG  +               T  +P   DWRE G V PVK+QG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG D G  CKF
Sbjct:   27 DESNPIKMVSDNLHEL----EDTVVQILGQSRHVLSFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAAQNCSATLKGSHKITEAT--VPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFN-------NFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG--CKF 240          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.491e-35
Identity = 86/191 (45.03%), Postives = 103/191 (53.93%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLR----RAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR----LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            FK KF K YA+ EE  HR ++F   L+       R+ K + +    I  FSDLT  E   T  G+ R+      LPK A      PT  + AD DWR KGAV PVKDQG CGSCW+FS   ALEGA+FL TG LVSLSEQ LVDC            + GCNGG    A++Y +   G+  E  YPY   D
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSA------PTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYG-------NQGCNGGWPYQAYQYIIANRGIDTESSYPYKAID 200          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.249e-35
Identity = 84/188 (44.68%), Postives = 105/188 (55.85%), Query Frame = 3
Query:  165 EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREEDYPY 719
            E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EFR  Y  G        K   +   + T   PA  DWREKGAV PVK QG CGSCW+FST G +EG   +A   LVSLSEQ LV CD         + DSGCNGGLM++AF + + +  G +  E  YPY
Sbjct:   38 EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPY 216          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.249e-35
Identity = 96/224 (42.86%), Postives = 116/224 (51.79%), Query Frame = 3
Query:   90 IRQVTDGGDEILSHHESTNNDLLGAEH---HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            IR VTD     L   EST    LG       F+ F  ++ K+Y S  E   RF IF  +L+      +   S   GI +F+D++  EFR T LG  +        +         LP   DWRE G V PVK+QG CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPY G +    CKF
Sbjct:   31 IRPVTDRAASAL---ESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN--GICKF 242          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.236e-34
Identity = 82/194 (42.27%), Postives = 108/194 (55.67%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            +K    + Y + EE + R  +++ N+R    H     +  HG T     F D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW+FS +G LEG  FL TGKL+SLSEQ LVDC H+         + GCNGGLM+ AF+Y  + GGL  EE YPY   D   +CK+
Sbjct:   32 WKSTHRRLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD--GSCKY 213          
The following BLAST results are available for this feature:
BLAST of CF835363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CYSP4_BRANA8.274e-3947.19Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
RD21A_ARATH1.081e-3848.54Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CATL_SCHMA1.411e-3848.63Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
XCP2_ARATH1.843e-3845.16Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CPR1_ARATH7.004e-3846.45Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
ALEUL_ARATH1.011e-3643.67Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CRUST_PANBO2.491e-3545.03Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP_TRYBB4.249e-3544.68Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CYSP2_MAIZE4.249e-3542.86Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATL1_RAT1.236e-3442.27Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01B22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835363 ID=CF835363; Name=CF835363; organism=Citrus sinensis; type=EST; length=753bp
CCGTTAAAACAGTGGTTCTCTTTCTGGTCTCTCTCGTCGTCTTCTCCGCT
GTTTCATCAGGGACGTTGATCGACGATGTTGATCAGATGATCAGGCAAGT
AACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACG
ACCTCTTGGGTGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAAT
AAAGCGTACGCTTCGCAGGAGGAGCACGACCATAGGTTCACTATTTTCAA
GGCCAACTTGCGACGCGCCGCGCGTCACCAGAAGCTCGACCCGAGCGCCA
CCCACGGCATCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGG
ACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCA
GGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGCGAG
AGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGC
TGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAAC
TGGAAAGCTTGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACG
AGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGCAATGGTGGG
CTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGGGCTTATGCG
GGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACGCCTGCAAAT
TTG
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