CF835363

Overview
NameCF835363
Unique NameCF835363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:43..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.332e-15
Identity = 54/192 (28.12%), Postives = 91/192 (47.40%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR-----KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 734
            F  +KK FNK+YA+ E+ +      + N   + ++ + +  A   I   SDL+  EF+  +L         K +   +A+        + PA+ D R+   V P++ QG CGSCW+FS   A E A      + + L+EQ+LVDC          +   GC+G  +    EY ++  G+++E  Y Y   ++
Sbjct:   26 FEEYKKAFNKSYATFEDEEAA----RKNFLESVKYVQSNGGA---INHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC----------ASQHGCHGDTIPRGIEY-IQHNGVVQESYYRYVAREQ 199          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 60/200 (30.00%), Postives = 89/200 (44.50%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH-QKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP-------ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACK 749
            F  +  K NK Y   E+  +R  I+ +N R    H Q+ D +   G  QF  L+  EF   YL         + +D +  +    LP          DWR    V   K+QG C S W+FS + +LE    +   + ++ S QQ+VDCD+          ++GC+GG    A EY L+  GL+   +YPY    +   CK
Sbjct:   29 FERWALKNNKFYTESEKL-YRMEIYNSNKRMIEEHNQREDVTYQMGENQFMTLSHEEFVDLYL---------QKSDSSVNIMGASLPEVQLEGLGAVDWRNYTTV---KEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN---------NTGCSGGYNAYAMEYVLRV-GLVSSTNYPYVA--KNQTCK 203          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 36/98 (36.73%), Postives = 50/98 (51.02%), Query Frame = 3
Query:  426 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            +P   DWR+ GAV  VK+Q  CG+CW+F+    +E    +  G L  LSEQQ++DC          +   GC GG    AFE+ +   G+     YPY
Sbjct:    2 VPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC----------AKGYGCKGGWEFRAFEFIISNKGVASGAIYPY 89          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 55/180 (30.56%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  213 SQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGA---VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS--LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            SQE++ +R   +  N  +A    +   +AT  + ++  LT  +  R   G  RK+  PK A     +      LP  +DWR       V PV++Q SCGSC+SF++ G LE    + T    +  LS Q++V C              GC GG          +  GL+ E  +PYTGTD
Sbjct:  159 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYM-EYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTD 328          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 55/180 (30.56%), Postives = 80/180 (44.44%), Query Frame = 3
Query:  213 SQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGA---VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS--LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            SQE++ +R   +  N  +A    +   +AT    ++  LT  +  R   G  RK+  PK A     +      LP  +DWR       V PV++Q SCGSC+SF++ G LE    + T    +  LS Q++V C              GC GG          +  GL+ E  +PYTGTD
Sbjct:  159 SQEKYSNRLYKYDHNFVKAINAIQKSWTATT-YKEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKVLHLPTSWDWRNIHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTSNSQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTD 328          
The following BLAST results are available for this feature:
BLAST of CF835363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
PEPT1_DERPT8.332e-1528.13Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CATL3_PARTE1.330e-1230.00Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
BROM2_ANACO1.921e-1136.73Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CATC_HUMAN4.279e-1130.56Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATC_PONAB5.588e-1130.56Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01B22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835363 ID=CF835363; Name=CF835363; organism=Citrus sinensis; type=EST; length=753bp
CCGTTAAAACAGTGGTTCTCTTTCTGGTCTCTCTCGTCGTCTTCTCCGCT
GTTTCATCAGGGACGTTGATCGACGATGTTGATCAGATGATCAGGCAAGT
AACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACG
ACCTCTTGGGTGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAAT
AAAGCGTACGCTTCGCAGGAGGAGCACGACCATAGGTTCACTATTTTCAA
GGCCAACTTGCGACGCGCCGCGCGTCACCAGAAGCTCGACCCGAGCGCCA
CCCACGGCATCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGG
ACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCA
GGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGCGAG
AGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGC
TGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAAC
TGGAAAGCTTGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACG
AGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGCAATGGTGGG
CTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGGGCTTATGCG
GGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACGCCTGCAAAT
TTG
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