CF835363

Overview
NameCF835363
Unique NameCF835363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:43..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 85/187 (45.45%), Postives = 114/187 (60.96%), Query Frame = 3
Query:  201 KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGP-VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACK 749
            K Y    E + RF IFK NL+R   H   DP+ ++  G+ +FSDLT  EF+ +YLG + + +   D  +       D LP + DWRE+GAV P VK QG CGSCW+F+ TGA+EG N + TG+LVSLSEQ+L+DCD        G+ + GC GG    AFE+  + GG++ +E Y YTG D   ACK
Sbjct:   50 KNYNGLGEKERRFKIFKDNLKRIEEHNS-DPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDR-------GNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTA-ACK 227          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 78/195 (40.00%), Postives = 112/195 (57.44%), Query Frame = 3
Query:  150 DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            DLL A  +F  F  KFNK Y+S+ E   RF IF+ NL       + D +A + I +FSDL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQL+DCD+          D+GCNGGL+++A+E  ++ GG+  E DYPY G+D
Sbjct:   20 DLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSD 205          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 84/186 (45.16%), Postives = 108/186 (58.06%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 725
            F  F   +N+ Y S+EE   R T+F  N+ RA + Q LD  +A +GIT+FSDLT  EF   YL     L+       +P    NDL P ++DWR+KGAV  VK+QG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+DY Y G
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYLN--PLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQG 339          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.754e-34
Identity = 81/203 (39.90%), Postives = 110/203 (54.19%), Query Frame = 3
Query:  150 DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL--RLPKDADQ--------APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 728
            D+  A+H+F  F   +NK Y   +  ++RF IFK NL       KL+ SA + I +FSDL+  E    Y GL  K    + +            AP    ++LP +FDWR    +  VKDQG+CGSCW+ +  G LE    +    L++LSEQQL+DCD         S +  C+GGLM++AFE  + AGGLM E DYPY GT
Sbjct:   24 DIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGT 217          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.754e-34
Identity = 81/198 (40.91%), Postives = 116/198 (58.59%), Query Frame = 3
Query:  171 HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            HF+ + K+  K Y+S+E + HR  +F  N R+   H + + +   G+ QFSD++ AE +  YL        P++        +  T   P+  DWR+KG  V PVK+QG+CGSCW+FSTTGALE A  +A+GK+++L+EQQLVDC    +       + GC GGL + AFEY L   G+M E+ YPY G  +   CKF
Sbjct:   32 HFTSWMKQHQKTYSSRE-YSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYILYNKGIMGEDSYPYIG--KNGQCKF 214          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.597e-34
Identity = 83/206 (40.29%), Postives = 113/206 (54.85%), Query Frame = 3
Query:  111 GDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            GD +L+  E  +N        F  +K ++NK Y+SQ+EHD RF  FKA  +  A H   + S   G+  ++DL+  EF      ++ K+  P       +     L   P+  DWR +  V PVKDQG CGSCW+F +TG+LEG N +  G+LVSLSEQQLVDC         GS   GC GG  +SAF+Y ++ G L  E +YPY
Sbjct:  211 GDNLLAKEEQASN-------LFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTL---VKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC-----AILTGS--QGCGGGFASSAFQYVMEIGSLATESNYPY 399          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.597e-34
Identity = 82/194 (42.27%), Postives = 107/194 (55.15%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            +K    + Y + EE + R  I++ N+R    H     +  HG +     F D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW+FS +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  + GGL  EE YPY   D   +CK+
Sbjct:   32 WKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD--GSCKY 213          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.136e-34
Identity = 83/201 (41.29%), Postives = 110/201 (54.73%), Query Frame = 3
Query:  150 DLLGAEHHFSLFKK--KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR---RKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            DL   E  + L+++    +    S  E   RF +FKAN+       K+D      + +F+D+T  EFR TY G +    K+           +      +PA  DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLVSLSEQ+LVDCD E         + GCNGGLM SAFE+  + GG+  E +YPYT  +
Sbjct:   29 DLESEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKE--------ENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQE 221          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.136e-34
Identity = 79/205 (38.54%), Postives = 114/205 (55.61%), Query Frame = 3
Query:  150 DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY---TGTDRGHACKF 752
            D+L A ++F  F  KFNK+Y+S+ E   RF IF+ NL         D +A + I +F+DL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   + ++LSEQQL+DCD           D+GC+GGL+++AFE  +  GG+  E DYPY    G  R +A KF
Sbjct:   20 DVLKAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKF 215          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.014e-34
Identity = 82/190 (43.16%), Postives = 105/190 (55.26%), Query Frame = 3
Query:  198 NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK--LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            ++ + S EE + R+ IFKAN+               G+  F+D++  E+R TYLG       P DA    +  ++   D  A  DWR +GAV P+K+QG CG CWSFSTTGA EGA +LA GK  LVSLSEQ L+DC            ++GC GGLM  AFEY +   G+  E  YPYT  D G  CKF
Sbjct:   37 HQRHYSSEEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGT------PFDASSLEMTESDKIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYG-------NNGCEGGLMTLAFEYIINNKGIDTESSYPYTAED-GKKCKF 212          
The following BLAST results are available for this feature:
BLAST of CF835363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CPR2_ARATH2.109e-3445.45Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATV_NPVHC2.109e-3440.00Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATF_MOUSE2.109e-3445.16Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATV_NPVAH2.754e-3439.90Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATH_RAT2.754e-3440.91Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CFAD_DICDI3.597e-3440.29Counting factor associated protein D OS=Dictyostel... [more]
CATL1_MOUSE3.597e-3442.27Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CYSEP_VIGMU6.136e-3441.29Vignain OS=Vigna mungo PE=1 SV=1[more]
CATV_NPVCF6.136e-3438.54Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CYSP7_DICDI8.014e-3443.16Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01B22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835363 ID=CF835363; Name=CF835363; organism=Citrus sinensis; type=EST; length=753bp
CCGTTAAAACAGTGGTTCTCTTTCTGGTCTCTCTCGTCGTCTTCTCCGCT
GTTTCATCAGGGACGTTGATCGACGATGTTGATCAGATGATCAGGCAAGT
AACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACG
ACCTCTTGGGTGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAAT
AAAGCGTACGCTTCGCAGGAGGAGCACGACCATAGGTTCACTATTTTCAA
GGCCAACTTGCGACGCGCCGCGCGTCACCAGAAGCTCGACCCGAGCGCCA
CCCACGGCATCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGG
ACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCA
GGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGCGAG
AGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGC
TGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAAC
TGGAAAGCTTGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACG
AGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGCAATGGTGGG
CTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGGGCTTATGCG
GGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACGCCTGCAAAT
TTG
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