CF835363

Overview
NameCF835363
Unique NameCF835363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:43..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.014e-34
Identity = 89/193 (46.11%), Postives = 105/193 (54.40%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            F+ F  +  K Y S EE   RF IF  NL+    H +   S   GI +F+DLT  EFR+  LG  +        +    L    LP   DWR+ G V PVK QG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPYTG  +   CKF
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLK--LTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTG--KNGICKF 238          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.014e-34
Identity = 82/205 (40.00%), Postives = 113/205 (55.12%), Query Frame = 3
Query:  150 DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY---TGTDRGHACKF 752
            DLL A  +F  F  KFNK Y+S+ E   RF IF+ NL       + D SA + I +FSDL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E  +  GG+  E DYPY    G  R +A KF
Sbjct:   20 DLLKAPSYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLSLPLQKQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKF 215          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.047e-33
Identity = 82/205 (40.00%), Postives = 113/205 (55.12%), Query Frame = 3
Query:  150 DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY---TGTDRGHACKF 752
            DLL A  +F  F   FNK Y+S+ E  HRF IF+ NL         D SA + I +FSDL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG+CG+CW+F+T G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E  +  GG+  E DYPY    G  R +A KF
Sbjct:   20 DLLKAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISKYTGLSLPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKF 215          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 143.665 bits (361), Expect = 1.047e-33
Identity = 84/198 (42.42%), Postives = 114/198 (57.58%), Query Frame = 3
Query:  171 HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            HF  +  K  K Y+++E H HR   F +N R+   H   + +    + QFSD++ AE +  YL        P++        +  T   P   DWR+KG  V PVK+QG+CGSCW+FSTTGALE A  +ATGK++SL+EQQLVDC  + +       + GC GGL + AFEY L   G+M E+ YPY G D G+ CKF
Sbjct:   34 HFKSWMSKHRKTYSTEEYH-HRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSE-----PQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD-GY-CKF 216          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.367e-33
Identity = 74/173 (42.77%), Postives = 102/173 (58.96%), Query Frame = 3
Query:  222 EHDHRFTIFKANLRRAARHQ-KLDPSATH--GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            EH+ RF +F  NL+    H  + D       G+ +F+DLT  EFR T+LG +   R     ++       +LP   DWREKGAV PVK+QG CGSCW+FS    +E  N L TG++++LSEQ+LV+C            +SGCNGGLM+ AF++ +K GG+  E+DYPY   D
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVEC-------STNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVD 235          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.785e-33
Identity = 83/199 (41.71%), Postives = 109/199 (54.77%), Query Frame = 3
Query:  144 NNDLLGAEHHFSLFKK--KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR----RKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            + DL   E  + L+++    +    S  E   RF +FKANL       K+D      + +F+D+T  EFR TY G +    R  R  P +           +P   DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLV+LSEQ+LVDCD E         + GCNGGLM SAFE+  + GG+  E +YPY
Sbjct:   27 DKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKE--------ENQGCNGGLMESAFEFIKQKGGITTESNYPY 217          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.785e-33
Identity = 80/187 (42.78%), Postives = 100/187 (53.48%), Query Frame = 3
Query:  183 FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            +K    + Y   EE   R  +++ N++    H +      HG T     F D+T  EFR+   G + +        Q P+    ++P   DWREKG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF Y    GGL  EE YPY G D
Sbjct:   32 WKATHRRLYGMNEEGWRR-AVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFA--EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRD 208          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.332e-33
Identity = 83/186 (44.62%), Postives = 107/186 (57.53%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 725
            F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR  YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+DY Y G
Sbjct:  187 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQG 361          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.045e-33
Identity = 83/200 (41.50%), Postives = 108/200 (54.00%), Query Frame = 3
Query:  165 EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            E  ++ +K   N+ Y   EE   R  +++ N++    H +      H  T     F D+T  EFR+   G + +        Q P+    + P   DWREKG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GGL  EE YPY  T+   +CK+
Sbjct:   26 EAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQG----NEGCNGGLMDYAFQYVADNGGLDSEESYPYEATE--ESCKY 213          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.977e-33
Identity = 76/173 (43.93%), Postives = 99/173 (57.23%), Query Frame = 3
Query:  201 KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            K+Y S EE   R+ IFKAN+    +          G+  F+D+T  E+R TYLG +          +  +  T+   A  DWR +GAV PVK+QG CG CWSFSTTG+ EGA+F + G+LVSLSEQ L+DC  E         +SGC+GGLM  AFEY +   G+  E  YPY
Sbjct:   39 KSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDASSLIGTQEEKVFTTSSA-ASKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE---------NSGCDGGLMTYAFEYIINNNGIDTESSYPY 200          
The following BLAST results are available for this feature:
BLAST of CF835363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CYSP3_SOLLC8.014e-3446.11Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATV_NPVAP8.014e-3440.00Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATV_NPVCD1.047e-3340.00Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATH_HUMAN1.047e-3342.42Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
ORYB_ORYSJ1.367e-3342.77Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSEP_PHAVU1.785e-3341.71Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CATL1_CANFA1.785e-3342.78Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATF_HUMAN2.332e-3344.62Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATL1_CERAE3.045e-3341.50Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CYSP5_DICDI3.977e-3343.93Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01B22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835363 ID=CF835363; Name=CF835363; organism=Citrus sinensis; type=EST; length=753bp
CCGTTAAAACAGTGGTTCTCTTTCTGGTCTCTCTCGTCGTCTTCTCCGCT
GTTTCATCAGGGACGTTGATCGACGATGTTGATCAGATGATCAGGCAAGT
AACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACG
ACCTCTTGGGTGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAAT
AAAGCGTACGCTTCGCAGGAGGAGCACGACCATAGGTTCACTATTTTCAA
GGCCAACTTGCGACGCGCCGCGCGTCACCAGAAGCTCGACCCGAGCGCCA
CCCACGGCATCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGG
ACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCA
GGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGCGAG
AGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGC
TGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAAC
TGGAAAGCTTGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACG
AGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGCAATGGTGGG
CTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGGGCTTATGCG
GGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACGCCTGCAAAT
TTG
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