CF835363

Overview
NameCF835363
Unique NameCF835363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:43..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.977e-33
Identity = 79/195 (40.51%), Postives = 112/195 (57.44%), Query Frame = 3
Query:  150 DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDAD---QAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            DLL A ++F  F  KFNK Y+S+ E  HRF IF+ NL       + D +A + I +FSDL+  E    Y GL     LP       +  IL  P +  P +FDWR+   V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQ +DCD           ++GC+GGL+++AFE  ++ GG+  E DYPY
Sbjct:   20 DLLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLS----LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPY 201          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.194e-33
Identity = 79/185 (42.70%), Postives = 103/185 (55.68%), Query Frame = 3
Query:  174 FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREEDYPY 719
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR  Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  E+ YPY
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD---------KTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPY 213          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33
Identity = 77/199 (38.69%), Postives = 114/199 (57.29%), Query Frame = 3
Query:  132 HESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            H+  ++     +H F  F+ +F + Y S  E   R  IF+ NL+        +  SA +GIT+F+D+T +E++    GL ++         A ++P    +LP +FDWR+K AV  VK+QGSCGSCW+FS TG +EG   + TG+L   SEQ+L+DCD         + DS CNGGLM++A++     GGL  E +YPY
Sbjct:  294 HKKHSHRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPY 482          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33
Identity = 87/211 (41.23%), Postives = 116/211 (54.98%), Query Frame = 3
Query:  150 DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLTPAEFRRTYLG----LRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            DL+  E H   +K +  K YA++ E   R  IF  N  + A+H +L      S   G+ +++D+   EF+ T  G    LR+ +R       A  +P   +  P   DWRE GAV  VKDQG CGSCW+FS+TGALEG +F   G LVSLSEQ LVDC  +         ++GCNGGLM++AF Y    GG+  E+ YPY G D   +C F
Sbjct:   22 DLIKEEWH--TYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGID--DSCHF 221          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.784e-33
Identity = 91/217 (41.94%), Postives = 111/217 (51.15%), Query Frame = 3
Query:   90 IRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            IR VTD     L   ES     LG   H   F+ F  ++ K+Y S  E   RF IF  +L       +       GI +FSD++  EF+ T LG  +        +   +     LP   DWRE G V PVK+Q  CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC         G  + GCNGGL + AFEY    GG+  EE YPY G +
Sbjct:   33 IRPVTDRAASTL---ESAVLGALGRTRHALRFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHL-MRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN 238          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.157e-32
Identity = 79/174 (45.40%), Postives = 101/174 (58.05%), Query Frame = 3
Query:  222 EHDHRFTIFKANLRRAARHQ-KLDPSATH--GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAV-GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            EH+ RF +F  NL+    H  + D       G+ +F+DLT  EFR TYLG     R  +  +         LP   DWR+KGAV  PVK+QG CGSCW+FS   A+EG N + TG+LVSLSEQ+LV+C            +SGCNGG+M+ AF +  + GGL  EEDYPYT  D
Sbjct:   84 EHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECAR-------NGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMD 250          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.157e-32
Identity = 84/198 (42.42%), Postives = 110/198 (55.56%), Query Frame = 3
Query:  171 HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            HF  +  +  K Y S EE+ HR  +F +N R+   H   + +   G+ QFSD++  E R  YL        P++        +  T   P   DWR+KG  V PVK+QGSCGSCW+FSTTGALE A  +ATGK++SL+EQQLVDC    +       + GC GGL + AFEY     G+M E+ YPY G D    CKF
Sbjct:   34 HFKSWMVQHQKKY-SLEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSE-----PQNCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQD--DHCKF 216          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.157e-32
Identity = 79/198 (39.90%), Postives = 114/198 (57.58%), Query Frame = 3
Query:  171 HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 752
            HF  + K+  K Y+S E ++HR  +F  N R+   H + + +    + QFSD++ AE +  +L        P++        +  T   P+  DWR+KG  V PVK+QG+C SCW+FSTTGALE A  +A+GK++SL+EQQLVDC    +       + GC GGL + AFEY L   G+M E+ YPY G D   +C+F
Sbjct:   32 HFKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFN-------NHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKD--SSCRF 214          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.511e-32
Identity = 79/178 (44.38%), Postives = 100/178 (56.18%), Query Frame = 3
Query:  198 NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRL----PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 719
            NKAY + +E   R+  FK N+               G+ Q +DL+  E+R  YLG R  ++L     ++       P    P + DWREK AV PVKDQG CGSC+SFSTTG++EG   + TGKLVSLSEQ ++DC      E       GCNGGLM +AFEY +K  GL  EE YPY
Sbjct:   42 NKAY-THKEFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNE-------GCNGGLMTNAFEYIIKNNGLNSEEQYPY 211          
BLAST of CF835363 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.511e-32
Identity = 77/178 (43.26%), Postives = 99/178 (55.62%), Query Frame = 3
Query:  213 SQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRL-----PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 731
            S  E   RF +FK N        K+D      + +F+D+T  EFR TY G + K        P+          + +PA  DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLVSLSEQ+LVDCD +         + GCNGGLM+ AFE+  + GG+  E +YPY   D
Sbjct:   50 SLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD--------QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYD 219          
The following BLAST results are available for this feature:
BLAST of CF835363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CATV_NPVOP3.977e-3340.51Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CYSP_TRYCR5.194e-3342.70Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CPR1_DROME6.784e-3338.69Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATL_SARPE6.784e-3341.23Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
ALEU_HORVU6.784e-3341.94Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP1_ORYSJ1.157e-3245.40Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATH_PIG1.157e-3242.42Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_MOUSE1.157e-3239.90Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CYSP3_DICDI1.511e-3244.38Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSEP_RICCO1.511e-3243.26Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01B22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835363 ID=CF835363; Name=CF835363; organism=Citrus sinensis; type=EST; length=753bp
CCGTTAAAACAGTGGTTCTCTTTCTGGTCTCTCTCGTCGTCTTCTCCGCT
GTTTCATCAGGGACGTTGATCGACGATGTTGATCAGATGATCAGGCAAGT
AACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACG
ACCTCTTGGGTGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAAT
AAAGCGTACGCTTCGCAGGAGGAGCACGACCATAGGTTCACTATTTTCAA
GGCCAACTTGCGACGCGCCGCGCGTCACCAGAAGCTCGACCCGAGCGCCA
CCCACGGCATCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGG
ACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCA
GGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGCGAG
AGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGC
TGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAAC
TGGAAAGCTTGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACG
AGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGCAATGGTGGG
CTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGGGCTTATGCG
GGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACGCCTGCAAAT
TTG
back to top