CF835371

Overview
NameCF835371
Unique NameCF835371
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:223..993. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835371 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.382e-28
Identity = 73/163 (44.79%), Postives = 100/163 (61.35%), Query Frame = -2
Query:  297 FGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLFQSKYLAWDSFPLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADITSRPAWAKVLA 770
            FG++PVL  GD K+FESRAI +YIA+++  +G  L   GK I     +  W +VEA  + PP   L   +V+ P+ G   D   ++E+E KLA++LDVYEA+L +++YLA D   L DL HLP    L+G P+ K  L   R HVSAW   I+SR AW +V A
Sbjct:   50 FGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLL--GKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 209          
BLAST of CF835371 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 122.865 bits (307), Expect = 1.996e-27
Identity = 72/163 (44.17%), Postives = 97/163 (59.51%), Query Frame = -2
Query:  288 FGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLFQSKYLAWDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 770
            FGQVP L+ GD  LFESRAI +Y A++      +L   G  +  A + VW EVEA Q+    + + ++++  PM G TTD   V+EN  KL K+L+VYEARL + KYLA D   L DL+H+     L  TP   + DA PHV AW + +  RP+  KV AL+K
Sbjct:   52 FGQVPALQDGDLYLFESRAICKYAARK---NKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CF835371 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.808e-27
Identity = 67/163 (41.10%), Postives = 96/163 (58.90%), Query Frame = -2
Query:  291 FGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEARLFQSKYLAWDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 770
            FGQ+P  + GD  LFESRAI +YI +++  +   L   G  +  A + VW EVE  Q++   S + +E +  P M G+ T+   V+E+  KL K+L+VYEARL QS YLA D     DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:   52 FGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CF835371 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.422e-26
Identity = 68/163 (41.72%), Postives = 95/163 (58.28%), Query Frame = -2
Query:  294 FGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQL---TCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLFQSKYLAWDSFPLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADITSRPAWAKVLAL 770
            FGQVP +E G  KLFESRAI +Y A ++ D+GT L   T  G+ I     W EVE   F   +  L   +V+KP  G   D A VEE + K  K+LDVYE RL  ++YL  D F L DL H+P +  ++  T +  L  +R +++ W  +I++RPAW K++ L
Sbjct:   51 FGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQ--WVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CF835371 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 8.387e-26
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = -2
Query:  288 FGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPM-FGMTTDPAAVEENEAKLAKILDVYEARLFQSKYLAWDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 770
            FGQVP L+ GD  L+ESRAI +Y+ ++      +L   G  K  A + VW EVE+ Q+ P  + + ++ + +PM FG   D   VEEN  KL K+L+VYEARL + KYLA D   + DL H+     L  TP   + DA PHV AW  D+ +RP+  KV +L+K
Sbjct:   52 FGQVPALQDGDLFLWESRAICKYVCRK---NKPELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CF835371 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.850e-24
Identity = 68/159 (42.77%), Postives = 90/159 (56.60%), Query Frame = -2
Query:  303 FGQVPVLEHGDQKLFESRAITQYIAQEFPDK---GTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLFQSKYLAWDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 770
            FG+VPVLE GD  LFESRAI +++ ++   +   G +L    +  A + VW EVEA Q  PP+  +  E V+ P  G   + A V+EN  KL K+L+VYEARL    YLA D   L DL     ++ L+ T    L  A PHVSAW   + +RPA  KV
Sbjct:   54 FGKVPVLEDGDLTLFESRAIARHVLRKHKPELLGGGRL----EQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of CF835371 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.532e-19
Identity = 61/164 (37.20%), Postives = 87/164 (53.05%), Query Frame = -2
Query:  303 FGQVPVLEHGDQKLFESRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLFQSKYLAWDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 770
            F ++P  + GD  LFESRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS    DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   52 FAKMPGFQDGDLVLFESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CF835371 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.873e-17
Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = -2
Query:  303 FGQVPVLEHGDQKLFESRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLFQSKYLAWDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 770
            F ++P  + G+    +SRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS    DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   52 FAKMPGFQDGESLHIKSRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
BLAST of CF835371 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.532e-16
Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = -2
Query:  336 FGQVPVLEHGD-QKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWK--EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLFQSKYLAWDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAA 770
            FG +PVLE  D  K++ESRAI++Y+  ++    + L  P  P A  L  +   VE   FDPP+S L +E V+  M G+ T+    ++    L   +D YE  L + KYLA + F L DL HLP    ++      + D++PHV AW A
Sbjct:   53 FGVIPVLEDEDGTKIYESRAISRYLVAKYGKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLP-YGAMVAQLEPTVLDSKPHVKAWWA 199          
The following BLAST results are available for this feature:
BLAST of CF835371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF3_ARATH1.382e-2844.79Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF1_MAIZE1.996e-2744.17Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF1_ORYSJ5.808e-2741.10Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF7_ARATH6.422e-2641.72Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF2_ORYSJ8.387e-2642.68Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF4_MAIZE7.850e-2442.77Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT1.532e-1937.20Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT1.873e-1734.76Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF5_ARATH3.532e-1637.16Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835371 ID=CF835371; Name=CF835371; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTTACGCAAAATACCCCCAGCTTCGTTTTATTAGGG
GACATAGATAAAATAAAAACCTCAAGCCATCAACATCAAAGTTGAATATG
AGGCAGTGCTGTTGAAATACAAAAGCGGTAGTACAAACTACAAAGCATCA
ATATTCTGCAAAATATTGATGACAAACGCCAAACAAGAAAATACGAACTC
CAAAACCAGCCTAATAGGTATTACAAAAGATAAGTGACCACCGAGGAGCG
ACTAACGTCTAGTAGGTAGCGGGCAAAGTGTTCAGTGTTTGAGCAAGGCA
AGGACCTTAGCCCAAGCCGGTCTGGAAGTGATATCAGCTGCCCATGCGCT
AACATGGGGGCGTGCATCAAACAGCTTCTTGACAGGCGTCCCCAACAACA
AATTAATATTGGGGAGATGATGCAAATCGACCAAGGGGAAGCTGTCCCAC
GCCAAGTATTTGGACTGAAACAAACGGGCCTCGTAAACATCTAAAATTTT
GGCAAGCTTAGCTTCATTTTCTTCAACCGCAGCTGGATCAGTGGTCATTC
CAAACATTGGCTTGTACACGAGCTCCCAGTTGAGCTTCGATGATGGGGGG
TCGAACTGGAGTGCCTCCACCTCCTTCCATACCAATAACGGGGCGATGGG
CTTGCCTGGGCATGTTAACTGGGTGCCTTTGTCTGGAAACTCCTGGGCGA
TGTATTGGGTGATTGCCCTTGATTCAAAGAGCTTCTGGTCGCCGTGTTCA
AGCACCGGAACTTGACCGAAT
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