CF835373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFV_ARATH (Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 9.881e-36 Identity = 78/162 (48.15%), Postives = 108/162 (66.67%), Query Frame = 2 Query: 50 NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 535 N+ SG+ + + +Y +LW CAGPL +P+ GE++YYFPQG+IE VEAST + ++ P+ DLPSK+ CRVI +QLK E ++DE +A++TL+P++ Q + E R V+SF K LTASDTS GGF V ++HA ECLPPLDMS+ PT Sbjct: 8 NAQPELSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNE----NQFRPLVNSFTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPT 161
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFE_ARATH (Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 1.290e-35 Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 2 Query: 86 GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 535 G + + +ELWHACAGPLV +P+ G VYYF QGH EQV ST + A Q+P Y +LPS+++C+V NV L A+ D+DE +AQ++L P ++ + + + FCKTLTASDTSTHGGFSV RR A++ PPLD S QPPT Sbjct: 45 GTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPT 195
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFO_ARATH (Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15 PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.201e-35 Identity = 79/171 (46.20%), Postives = 110/171 (64.33%), Query Frame = 2 Query: 20 ETGRIPMERQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 ETG + N+ SG+ + + +Y +LW CAGPL +P+ GE+VYYFPQG+IE VEAST + ++ P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q + E R V+SF K LTASD S +G FSV ++HA ECLPPLDMS+ P Sbjct: 2 ETGNVV----NAQPELSGI--IDRSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTQVVIPTQNE----NQFRPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLP 162
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSJ (Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.904e-35 Identity = 72/144 (50.00%), Postives = 96/144 (66.67%), Query Frame = 2 Query: 101 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 A+ +ELWHACAGPLV++P G V YFPQGH EQV AS ++ D LPSK++C+++++ L A+ +TDE +AQ+TL P + D +A+ + FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP Sbjct: 20 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPP 163
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFG_ARATH (Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 6.404e-35 Identity = 74/141 (52.48%), Postives = 92/141 (65.25%), Query Frame = 2 Query: 110 TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 +ELWHACAGPL+++P G V YFPQGH EQV AS + D +LPSK++C + NV L A+P+TDE +AQ+TL P + D +A+ R FCKTLTASDTSTHGGFSV RR A++ P LD S QPP Sbjct: 23 SELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPP 163
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFU_ORYSJ (Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.092e-34 Identity = 76/144 (52.78%), Postives = 96/144 (66.67%), Query Frame = 2 Query: 113 ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQ---DENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 ELW+ACAGPLV++P +G + YFPQGH EQV AS + AD Q+P Y +LPSK++C + +V + A+PDTDE +A++TL P SN D+ + R FCKTLTASDTSTHGGFSV RR A+ P LD S QPP Sbjct: 25 ELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPP 168
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSI (Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.427e-34 Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = 2 Query: 101 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 A+ +ELWHACAGPLV++P G V YFPQGH EQV AS ++ D LPSK++C+++++ L A+ +TDE + Q+TL P + D +A+ + FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP Sbjct: 20 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKLLSLTLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPP 163
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFT_ARATH (Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 1.863e-34 Identity = 76/169 (44.97%), Postives = 107/169 (63.31%), Query Frame = 2 Query: 20 ETGRIPMERQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQ 526 ETG + N+ SG+ + + +Y +LW CAGPL +P+ GE VYYFPQG+IE V+AST + ++ P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q + E R V+SF K LTASDTS +GGF V ++HA ECLPPL + Q Sbjct: 2 ETGNVV----NAQPELSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSE----NQFRPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLPLPAQ 160
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFC_ARATH (Auxin response factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 2.434e-34 Identity = 75/150 (50.00%), Postives = 94/150 (62.67%), Query Frame = 2 Query: 113 ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEK--------EXXXXXXXRFHV-HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 535 ELWHACAGPL+++P+ G V YFPQGH+EQ D +Y LP + CR+++V+L AE TDE +AQV+LLPES E V + E R + H FCKTLTASDTSTHGGFSV RR A++C PPLD S+ P+ Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPS 196
BLAST of CF835373 vs. ExPASy Swiss-Prot
Match: ARFS_ARATH (Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 7.081e-34 Identity = 73/141 (51.77%), Postives = 91/141 (64.54%), Query Frame = 2 Query: 110 TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEAFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 532 ++LWHACAGPLV++P G V YFPQGH EQV AS + D +LPSK++C + +V L A+ +TDE +AQ+TL P + D A+ R FCKTLTASDTSTHGGFSV RR A++ PPLD S QPP Sbjct: 22 SQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPP 162 The following BLAST results are available for this feature:
BLAST of CF835373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835373 ID=CF835373; Name=CF835373; organism=Citrus sinensis; type=EST; length=537bpback to top |