CF835376

Overview
NameCF835376
Unique NameCF835376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:941..1817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: EDL10_ARATH (Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.422e-35
Identity = 75/199 (37.69%), Postives = 118/199 (59.30%), Query Frame = -3
Query:  279 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFS 875
            GIGL+++QQLSG +G+ +YS+ IF  AG S   + +   GV  +    V   L+D+ GRR        GM+    L+ ++F L+    E + F   + +   + ++     F++G+G +PW+IMSEI P+NIK  AGS+  L +W   W V+   NF+ +WS+ GTF I+ +V   ++ F+ + VPETKG+SLEE+Q S
Sbjct:  260 GIGLMLIQQLSGASGITYYSNAIFRKAGFSE-RLGSMIFGVFVIPKALVGLILVDRWGRRPLLLASAVGMSIGSLLIGVSFTLQ----EMNLFPEFIPVFVFINILVYFGFFAIGIGGLPWIIMSEIFPINIKVSAGSIVALTSWTTGWFVSYGFNFMFEWSAQGTFYIFAMVGGLSLLFIWMLVPETKGQSLEELQAS 453          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: EDL18_ARATH (Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.060e-34
Identity = 82/199 (41.21%), Postives = 118/199 (59.30%), Query Frame = -3
Query:  279 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFS 875
            GIGL+++QQ SG + VL Y+S I   AG S +  +T  LG+  +    +   L+DK GRR       SGM  +  L+ +AF L+           +  + + + +   + ++++G+G +PWVIMSEI P+NIK  AGS+ TL +W  S IVT   NFLL+WS+ GTF ++G V    + F+ L VPETKG SLEEIQ S
Sbjct:  274 GIGLMLIQQFSGSSAVLSYASTILRKAGFSVTIGSTL-LGLFMIPKAMIGVILVDKWGRRPLLLTSVSGMCITSMLIGVAFTLQKM----QLLPELTPVFTFICVTLYIGTYAIGLGGLPWVIMSEIFPMNIKVTAGSIVTLVSWSSSSIVTYAFNFLLEWSTQGTFYVFGAVGGLALLFIWLLVPETKGLSLEEIQAS 467          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: EDL12_ARATH (Sugar transporter ERD6-like 12 OS=Arabidopsis thaliana GN=SUGTL5 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.060e-34
Identity = 78/200 (39.00%), Postives = 115/200 (57.50%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 875
            GIGL++LQQL G  G+  Y S +F  AG  +  +    L ++ V  + +   L+D+ GRR        G+  S   +++AF     V +      I  I   +G+++  + F++G+GA+PW+IMSEI P++IK LAGS+ T+ANW   WI     NF+L WS  GTF+I  I+C  T+ F    VPET+  +LEEIQ SF
Sbjct:  265 GIGLMLLQQLCGTAGISSYGSTLFKLAGFPA-RIGMMVLSLIVVPKSLMGLILVDRWGRRPLLMTSALGLCLSCITLAVAFG----VKDVPGIGKITPIFCFIGILSFTMMFAIGMGALPWIIMSEIFPMDIKVLAGSLVTIANWFTGWIANYAFNFMLVWSPSGTFIISAIICGATIVFTWCLVPETRRLTLEEIQLSF 459          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: EDL13_ARATH (Putative sugar transporter ERD6-like 13 OS=Arabidopsis thaliana GN=At3g20460 PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.691e-34
Identity = 77/197 (39.09%), Postives = 112/197 (56.85%), Query Frame = -3
Query:  285 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQ 875
            GIGLLVLQQL G++G  FY S+IF  +G  + NV      VVQ V + +   ++DK GRR         M     +  ++F  + +            I + +G++  + S ++G+G IPWV++SE+ P+NIK  AG++  L +W  +W V+ T NFL  WSS G F IY ++    + FV   VPET+GRSLEEIQ
Sbjct:  292 GIGLLVLQQLGGLSGYTFYLSSIFKKSGFPN-NVGVMMASVVQSVTSVLGIVIVDKYGRRSLLTVATIMMCLGSLITGLSFLFQSY----GLLEHYTPISTFMGVLVFLTSITIGIGGIPWVMISEMTPINIKGSAGTLCNLTSWSSNWFVSYTFNFLFQWSSSGVFFIYTMISGVGILFVMKMVPETRGRSLEEIQ 483          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: EDL17_ARATH (Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.023e-33
Identity = 81/199 (40.70%), Postives = 118/199 (59.30%), Query Frame = -3
Query:  279 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFS 875
            GIGL+++QQ SG   V+ Y+S IF  AG S + + T  LG+  +    +   L+DK GRR        GM+ +  L+ +AF L+           +  ILS + ++  + ++++G+G +PWVIMSEI P+NIK  AGS+ TL ++  S IVT   NFL +WS+ GTF I+  +    + F+ L VPETKG SLEEIQ S
Sbjct:  270 GIGLMLIQQFSGSAAVISYASTIFRKAGFSVA-IGTTMLGIFVIPKAMIGLILVDKWGRRPLLMTSAFGMSMTCMLLGVAFTLQKM----QLLSELTPILSFICVMMYIATYAIGLGGLPWVIMSEIFPINIKVTAGSIVTLVSFSSSSIVTYAFNFLFEWSTQGTFFIFAGIGGAALLFIWLLVPETKGLSLEEIQVS 463          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: EDL11_ARATH (Sugar transporter ERD6-like 11 OS=Arabidopsis thaliana GN=At3g05165 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.744e-33
Identity = 75/199 (37.69%), Postives = 115/199 (57.79%), Query Frame = -3
Query:  279 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFS 875
            GIGL+++QQLSG +G+ +YS+ IF  AG S   + +   GV  +    V   L+D+ GRR        GM+    L+ ++F L+    + +    ++ I   V ++     F+ G+G +PWVIMSEI P+NIK  AG++  L +W   W V+   NF+ +WS+ GTF I+  V   +  F+ + VPETKG+SLEE+Q S
Sbjct:  269 GIGLMLIQQLSGASGITYYSNAIFRKAGFSE-RLGSMIFGVFVIPKALVGLILVDRWGRRPLLLASAVGMSIGSLLIGVSFTLQ----QMNVLPELIPIFVFVNILVYFGCFAFGIGGLPWVIMSEIFPINIKVSAGTIVALTSWTSGWFVSYAFNFMFEWSAQGTFYIFAAVGGMSFIFIWMLVPETKGQSLEELQAS 462          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: EDL14_ARATH (Sugar transporter ERD6-like 14 OS=Arabidopsis thaliana GN=At4g04750 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 5.075e-33
Identity = 76/200 (38.00%), Postives = 119/200 (59.50%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 875
            G+ L+ + QL G+NG  FY+  IF + G+SS ++      +VQ+    +   L+D +GRR       +GM       +I+FFL+    +++ + +   I++L+ ++    S+ LG+G IPW+I SEI PV++K  AG+V  L   + SW+VT + NFLL WSS GTF+++  V      F +  VPETKG+SLEEIQ +F
Sbjct:  277 GVVLISMPQLGGLNGYTFYTDTIFTSTGVSS-DIGFILTSIVQMTGGVLGVLLVDISGRRSLLLFSQAGMFLGCLATAISFFLQ----KNNCWETGTPIMALISVMVYFGSYGLGMGPIPWIIASEIYPVDVKGAAGTVCNLVTSISSWLVTYSFNFLLQWSSTGTFMMFATVMGLGFVFTAKLVPETKGKSLEEIQSAF 471          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: EDL15_ARATH (Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.132e-31
Identity = 75/200 (37.50%), Postives = 118/200 (59.00%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 875
            G+ L+ L QL G+NG  FY+ +IF + G+SS +       VVQ+    + T L+D +GRR       +GM       +I+FFL+    E+  + +   +L+L  ++    S+  G+G+IPW+I SEI PV++K  AG++  L + + +W+V  + ++LL WSS GTFL++  V      F++  VPETKG+SLEEIQ  F
Sbjct:  273 GVVLIALPQLGGLNGYSFYTDSIFISTGVSS-DFGFISTSVVQMFGGILGTVLVDVSGRRTLLLVSQAGMFLGCLTTAISFFLK----ENHCWETGTPVLALFSVMVYFGSYGSGMGSIPWIIASEIYPVDVKGAAGTMCNLVSSISAWLVAYSFSYLLQWSSTGTFLMFATVAGLGFVFIAKLVPETKGKSLEEIQSLF 467          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.882e-28
Identity = 71/204 (34.80%), Postives = 114/204 (55.88%), Query Frame = -3
Query:  273 GIGLLVLQQLSGINGVLFYSSNIFANAG--ISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD-WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 875
            GIGL + QQ+ G N VL+Y+  IF + G  +S++ +A  G+G+  V+ T +   +MDK  R+        GM  S F++SI     G     +       I+S++ L   +  FS   G + WV++ E+ P+NI+ L  S A++ NW  + IV++T   LLD + +G  F+ YGI+C  ++ FV   V ET+ RSLE+I+ + R
Sbjct:  247 GIGLAIFQQVMGCNTVLYYAPTIFTDVGFGVSAALLAHIGIGIFNVIVTAIAVAIMDKIDRKKIVNIGAVGMGISLFVMSIGMKFSGGSQTAA-------IISVIALTVYIAFFSATWGPVMWVMIGEVFPLNIRGLGNSFASVINWTANMIVSLTFPSLLDFFGTGSLFIGYGILCFASIWFVQKKVFETRNRSLEDIEATLR 443          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR8_MOUSE (Solute carrier family 2, facilitated glucose transporter member 8 OS=Mus musculus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.430e-27
Identity = 69/214 (32.24%), Postives = 115/214 (53.74%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGI-------------LSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 875
            GI L+V QQLSG+N ++FY+++IF  A    S++A+  +G++QV+ T V   +MD+AGRR         M  S       F L   +  +S    ++ I             L++  +   +  F++G G IPW++MSEI P+++K +A  +  L NW ++++VT   + +++     G F +    CA +V F    VPETKGR+LE++   F
Sbjct:  261 GISLMVFQQLSGVNAIMFYANSIFEEAKFKDSSLASVTVGIIQVLFTAVAALIMDRAGRRLLLALSGVIMVFSMSAFGTYFKLTQSLPSNSSHVGLVPIAAEPVDVQVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWFMAFLVTKEFSSVMEMLRPYGAFWLTAAFCALSVLFTLTVVPETKGRTLEQVTAHF 474          
The following BLAST results are available for this feature:
BLAST of CF835376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
EDL10_ARATH5.422e-3537.69Sugar transporter ERD6-like 10 OS=Arabidopsis thal... [more]
EDL18_ARATH2.060e-3441.21Sugar transporter ERD6-like 18 OS=Arabidopsis thal... [more]
EDL12_ARATH2.060e-3439.00Sugar transporter ERD6-like 12 OS=Arabidopsis thal... [more]
EDL13_ARATH2.691e-3439.09Putative sugar transporter ERD6-like 13 OS=Arabido... [more]
EDL17_ARATH1.023e-3340.70Sugar transporter ERD6-like 17 OS=Arabidopsis thal... [more]
EDL11_ARATH1.744e-3337.69Sugar transporter ERD6-like 11 OS=Arabidopsis thal... [more]
EDL14_ARATH5.075e-3338.00Sugar transporter ERD6-like 14 OS=Arabidopsis thal... [more]
EDL15_ARATH2.132e-3137.50Sugar transporter ERD6-like 15 OS=Arabidopsis thal... [more]
XYLT_LACBR2.882e-2834.80D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
GTR8_MOUSE1.430e-2732.24Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835376 ID=CF835376; Name=CF835376; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTCCCAAAACTGGAGATAATTATTTACTACCCCTTAA
TGTTCCAGTGAAAAAGAGTAATTTATCCATTGCCCTTTCCTTTTCCCCTT
CAACAACACCACAAAGCAACTGTCGTAGACCGCCCCTACAGATGATACAA
TGAACTATGGAGCAATGATGGAAGCAATTCGCACAAATAAAAGCGCATTG
ACATATACTTGGGAAGGATTAGGACACATGGGTGGAGAAGCTCTTTATTA
CAAATGCAAGCCAACAATTTTATCTGAAGGAAAACTGAATTTCTTCCAGA
CTTCTTCCTTTGGTTTCAGGAACCCAGAGAGACACAAAAGCAACAGTGAA
AGCACACACTATCCCGTATATCAAGAAGGTGCCTCCACTGCTCCAATCTA
ACAGAAAATTTGCAGTCATTGTGACAATCCACGATACCAGCCAGTTTGCC
AACGTTGCAACACTGCCAGCAAGGCTCTTGATATTCACTGGAAGTATCTC
GGACATTATAACCCAAGGAATAGCTCCAACTCCCAAAGAGAATGAAATCA
CTACAGTCACAAGACCGACAAGCGACAATATCCCCAATATGCTATAAAAG
CGAGAATCTTCTGACACAAAACCCTCCAAAAAGAATGCAATCGAAACAAG
GAAAAAACTAGCAGCCATTCCAGATGATGATATTAAAAGAAGAAGCCTGC
GGCCAGCTTTGTCCATCAACCATGTATTGACCCCAGTGGCAACAACCTGA
ACAACCCCAAGTCCAAATGTAGCAACGTTACTTGATGAAATCCCAGCGTT
AGCAAAAATGTTACTGGAATAGAATAAAACACCATTGATGCCACTGAGTT
GCTGAAGAACCAGTAATCCTATTCCTA
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