CF835376

Overview
NameCF835376
Unique NameCF835376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:941..1817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR5_HORSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Equus caballus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.989e-17
Identity = 57/204 (27.94%), Postives = 107/204 (52.45%), Query Frame = -3
Query:  276 IGLLVL---QQLSGINGVLFYSSNIFANAGISSSNV--ATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 872
            I +++L   QQLSG+N + +Y+  I+ +AG+   +V   T G G V V+ T    ++++  GRR       S    +  ++++A  L+  VS        +  +S+V +++ VI  +LG   IP ++++E+   + +S A  V    +WL ++ V +   F+       +F+I+ ++C  T  ++ L VPETKG++  EI   F
Sbjct:  279 ISIIILMGGQQLSGVNAIYYYADQIYLSAGVKDQDVQYVTVGTGAVNVLMTICAVFVVEYLGRRALLLLGFSVCFIACCVLTVALALQDRVSW-------MPYISIVCVISYVIGHALGPSPIPALLITEVFLQSSRSAAYMVGGTVHWLSNFAVGLVFPFIQVGLGAYSFIIFAVICLLTTIYIFLIVPETKGKTFVEINHIF 475          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: RGT2_YEAST (High-affinity glucose transporter RGT2 OS=Saccharomyces cerevisiae GN=RGT2 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.904e-17
Identity = 58/207 (28.02%), Postives = 99/207 (47.83%), Query Frame = -3
Query:  273 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGT------FLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 875
            GI +   QQ SGIN + +Y  N F N G+ +S + +F    V V  +    +L+D+ GRR         MA +  +++I    EG     S+       + +  +   + +FS   G + WV+ +E+ P+ ++S   ++   ANWLV++   +   +++D  S  +      F I+G +    V  V   V ET+G +LEEI   FR
Sbjct:  361 GIAIQAFQQASGINFIFYYGVNFFNNTGVDNSYLVSFISYAVNVAFSIPGMYLVDRIGRRPVLLAGGVIMAIANLVIAIVGVSEGKTVVASK-------IMIAFICLFIAAFSATWGGVVWVVSAELYPLGVRSKCTAICAAANWLVNFTCALITPYIVDVGSHTSSMGPKIFFIWGGLNVVAVIVVYFAVYETRGLTLEEIDELFR 560          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: MSSP3_ARATH (Monosaccharide-sensing protein 3 OS=Arabidopsis thaliana GN=MSSP3 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.098e-17
Identity = 67/208 (32.21%), Postives = 97/208 (46.63%), Query Frame = -3
Query:  276 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGV--VQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFV-----SEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLL-DWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 875
            G+GL +LQQ +GINGV++Y+  I    G+SS  +   G+      ++ + + T LM                  S  L +I   +   V     S  +   SI  ++S   +   +  F +G GAIP ++ SEI P +++ L  ++  L  W+   IVT T   +L      G F IY IVCA    FV L VPETKG  LE I   F
Sbjct:  515 GVGLQILQQFAGINGVMYYTPQILEETGVSSL-LTNLGISAESASLLISALTTLLM---------LPCILVSMRSLMLSTIPILILSLVTLVIGSLVNLGGSINALISTASVTVYLSCFVMGFGAIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFVYLKVPETKGMPLEVISEFF 712          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: SNF3_YEAST (High-affinity glucose transporter SNF3 OS=Saccharomyces cerevisiae GN=SNF3 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 8.696e-17
Identity = 59/202 (29.21%), Postives = 98/202 (48.51%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSS------GGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 875
            GI L   QQ SGIN + +Y  N F   G+S+S + +F    V VV      + ++  GRR         +     +++IA F+   V    +  +   ++ +  +   + +FS   G + WVI +E+ P+ ++S   ++   ANWLV++I  +   +++D  S         F I+G + A  V  V L V ETKG +LEEI
Sbjct:  359 GIALQAFQQFSGINFIFYYGVNFFNKTGVSNSYLVSFITYAVNVVFNVPGLFFVEFFGRRKV-------LVVGGVIMTIANFIVAIVGCSLKTVAAAKVM-IAFICLFIAAFSATWGGVVWVISAELYPLGVRSKCTAICAAANWLVNFICALITPYIVDTGSHTSSLGAKIFFIWGSLNAMGVIVVYLTVYETKGLTLEEI 552          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 69/210 (32.86%), Postives = 102/210 (48.57%), Query Frame = -3
Query:  288 GIGLLVLQQLSGINGVLFYSSNIFANAGIS--------SSNVATFGLG----VVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSG--GTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 875
            G+G+ +LQQ SGINGVL+Y+  I   AG+         SS  A+F +     ++ + A  V   LMD +GRR         +  S  ++ I+  +   +S+      +   LS   +V     F +G G IP ++ SEI P  ++ L  ++  +  W+   IVT +   LL  S G  G F IY  VC  +  FV + VPETKG  LE I
Sbjct:  514 GVGIQILQQFSGINGVLYYTPQILERAGVDILLSSLGLSSISASFLISGLTTLLMLPAIVVAMRLMDVSGRRSLLLWTIPVLIVSLVVLVISELIH--ISK-----VVNAALSTGCVVLYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLLS-SIGLVGVFSIYAAVCVISWIFVYMKVPETKGMPLEVI 715          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR10_XENTR (Solute carrier family 2, facilitated glucose transporter member 10 OS=Xenopus tropicalis GN=slc2a10 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.316e-16
Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = -3
Query:  276 YSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-----ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 596
            Y+IL  ++L+ ++  V +FS+G G + W+++SEI P +I+  A +     NW  + ++T+T     A+  L W    TFL+YG+V    +AF+  ++PETKG+SLEEI   F
Sbjct:  414 YTILNWITLLSMMAFVSAFSIGFGPMTWIVLSEIYPADIRGRAFAFCNSFNWAANLLITLTFLDVIASIGLSW----TFLLYGVVGLLAIAFIYFFIPETKGQSLEEIDKQF 521          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR5_PONAB (Solute carrier family 2, facilitated glucose transporter member 5 OS=Pongo abelii GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 54/195 (27.69%), Postives = 99/195 (50.77%), Query Frame = -3
Query:  276 QQLSGINGVLFYSSNIFANAGISSSNV--ATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 854
            QQLSG+N + +Y+  I+ +AG+   +V   T G G V VV T    ++++  GRR         +  S  LV+          +D+   S +  +S+V +++ VI  +LG   IP ++++EI   + +  A  V    +WL ++ V +   F+ +     +F+++ ++C  T  ++ L VPETK ++  EI   F
Sbjct:  288 QQLSGVNAIYYYADQIYLSAGVPKEHVQFVTAGTGAVNVVMTFCAVFVVELLGRRLLLL-----LGFSICLVACCVLTAALALQDT--VSWMPYISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSNFTVGLIFPFIQEGLGPYSFIVFAVICLLTTIYIFLIVPETKAKTFIEINQIF 475          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT7_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT7 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.362e-16
Identity = 60/195 (30.77%), Postives = 93/195 (47.69%), Query Frame = -3
Query:  288 LQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFL-VSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEI 857
            LQQL+G N   +Y + IF   G+S S   +  LG+V   +T V  +++++ GRR       + M A   +  S+         +D       G   +V     +  F+     IP+V++SE  P+ +KS A S+AT ANWL  +++     F   + +G     YG V      F   +V L VPETKG +LEE+
Sbjct:  334 LQQLTGDNYFFYYGTTIFKAVGLSDSFETSIVLGIVNFASTFVGIYVVERYGRRTCLLWGAASMTACMVVYASVGVTRLWPNGQDQPSSKGAGNCMIVFACFYIFCFATTWAPIPYVVVSETFPLRVKSKAMSIATAANWLWGFLI----GFFTPFITGAINFYYGYVFMGCLVFMFFYVLLVVPETKGLTLEEV 524          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: HXT6_YEAST (High-affinity hexose transporter HXT6 OS=Saccharomyces cerevisiae GN=HXT6 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.362e-16
Identity = 60/195 (30.77%), Postives = 93/195 (47.69%), Query Frame = -3
Query:  288 LQQLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFL-VSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEI 857
            LQQL+G N   +Y + IF   G+S S   +  LG+V   +T V  +++++ GRR       + M A   +  S+         +D       G   +V     +  F+     IP+V++SE  P+ +KS A S+AT ANWL  +++     F   + +G     YG V      F   +V L VPETKG +LEE+
Sbjct:  334 LQQLTGDNYFFYYGTTIFKAVGLSDSFETSIVLGIVNFASTFVGIYVVERYGRRTCLLWGAASMTACMVVYASVGVTRLWPNGQDQPSSKGAGNCMIVFACFYIFCFATTWAPIPYVVVSETFPLRVKSKAMSIATAANWLWGFLI----GFFTPFITGAINFYYGYVFMGCLVFMFFYVLLVVPETKGLTLEEV 524          
BLAST of CF835376 vs. ExPASy Swiss-Prot
Match: GTR7_RAT (Solute carrier family 2, facilitated glucose transporter member 7 OS=Rattus norvegicus GN=Slc2a7 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.362e-16
Identity = 53/201 (26.37%), Postives = 98/201 (48.76%), Query Frame = -3
Query:  276 IGLLVLQQLSGINGVLFYSSNIFANAGISS--SNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 872
            I L+  QQLSGIN V +Y+  I+ +AG+ +  S   T G GVV +V T  +  L+++ GRR           ++  ++++    +  V E       L  L ++ +   +   S+G   +P V+ +EI   + +  A  V    +WL ++I+      + +     +F+I+  +C  T  ++ + +PETKG++  EI   F
Sbjct:  288 IVLMAGQQLSGINAVNYYADTIYTSAGVEAAHSQYVTVGSGVVNIVMTITSAVLVERLGRRHLLLAGYGICGSACLVLTVVLLFQNRVPE-------LSYLGIICVFAYIAGHSIGPSPVPPVVRTEIFLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAIGAYSFIIFAGICLLTAIYIYVVIPETKGKTFVEINRIF 481          
The following BLAST results are available for this feature:
BLAST of CF835376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
GTR5_HORSE2.989e-1727.94Solute carrier family 2, facilitated glucose trans... [more]
RGT2_YEAST3.904e-1728.02High-affinity glucose transporter RGT2 OS=Saccharo... [more]
MSSP3_ARATH5.098e-1732.21Monosaccharide-sensing protein 3 OS=Arabidopsis th... [more]
SNF3_YEAST8.696e-1729.21High-affinity glucose transporter SNF3 OS=Saccharo... [more]
MSSP1_ARATH2.530e-1632.86Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
GTR10_XENTR4.316e-1637.50Solute carrier family 2, facilitated glucose trans... [more]
GTR5_PONAB5.637e-1627.69Solute carrier family 2, facilitated glucose trans... [more]
HXT7_YEAST7.362e-1630.77High-affinity hexose transporter HXT6 OS=Saccharom... [more]
HXT6_YEAST7.362e-1630.77High-affinity hexose transporter HXT6 OS=Saccharom... [more]
GTR7_RAT7.362e-1626.37Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835376 ID=CF835376; Name=CF835376; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTCCCAAAACTGGAGATAATTATTTACTACCCCTTAA
TGTTCCAGTGAAAAAGAGTAATTTATCCATTGCCCTTTCCTTTTCCCCTT
CAACAACACCACAAAGCAACTGTCGTAGACCGCCCCTACAGATGATACAA
TGAACTATGGAGCAATGATGGAAGCAATTCGCACAAATAAAAGCGCATTG
ACATATACTTGGGAAGGATTAGGACACATGGGTGGAGAAGCTCTTTATTA
CAAATGCAAGCCAACAATTTTATCTGAAGGAAAACTGAATTTCTTCCAGA
CTTCTTCCTTTGGTTTCAGGAACCCAGAGAGACACAAAAGCAACAGTGAA
AGCACACACTATCCCGTATATCAAGAAGGTGCCTCCACTGCTCCAATCTA
ACAGAAAATTTGCAGTCATTGTGACAATCCACGATACCAGCCAGTTTGCC
AACGTTGCAACACTGCCAGCAAGGCTCTTGATATTCACTGGAAGTATCTC
GGACATTATAACCCAAGGAATAGCTCCAACTCCCAAAGAGAATGAAATCA
CTACAGTCACAAGACCGACAAGCGACAATATCCCCAATATGCTATAAAAG
CGAGAATCTTCTGACACAAAACCCTCCAAAAAGAATGCAATCGAAACAAG
GAAAAAACTAGCAGCCATTCCAGATGATGATATTAAAAGAAGAAGCCTGC
GGCCAGCTTTGTCCATCAACCATGTATTGACCCCAGTGGCAACAACCTGA
ACAACCCCAAGTCCAAATGTAGCAACGTTACTTGATGAAATCCCAGCGTT
AGCAAAAATGTTACTGGAATAGAATAAAACACCATTGATGCCACTGAGTT
GCTGAAGAACCAGTAATCCTATTCCTA
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