CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: EDL17_ARATH (Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.282e-42
Identity = 81/172 (47.09%), Postives = 114/172 (66.28%), Query Frame = 1
Query:  256 GPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            G   FG   GY+S  +  ++ DL L+I++FS FGS A +GA +GA+  G +A  IGR+G++ ++    I GWL I+F+K+   L  GR++ G G G+ SY VPVYIAEI P+++RG+    NQL    G+ + Y  G F+ WR LA+LG LPC + + GLFF+PESPRWLAK
Sbjct:   41 GSFSFGVATGYTSGAETGVMKDLDLSIAQFSAFGSFATLGAAIGALFCGNLAMVIGRRGTMWVSDFLCITGWLSIAFAKEVVLLNFGRIISGIGFGLTSYVVPVYIAEITPKHVRGTFTFSNQLLQNAGLAMIYFCGNFITWRTLALLGALPCFIQVIGLFFVPESPRWLAK 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ERDL9_ARATH (Sugar transporter ERD6-like 9 OS=Arabidopsis thaliana GN=At3g05155 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.188e-42
Identity = 83/168 (49.40%), Postives = 116/168 (69.05%), Query Frame = 1
Query:  268 FGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            FG   G+++ T A I+ DL L+I++FS+FGSL   G M+GA+ S  IA+  G K +L I  V  I GWL I+ +K+  +L +GR   G GVG++SY VPVYIAEI P+ +RG+    NQL    G+  AY LG F++WR++A++G+LPC + + GLFF+PESPRWLAK
Sbjct:   41 FGVALGHTAGTMASIMEDLDLSITQFSVFGSLLTFGGMIGALFSATIADSFGCKMTLWITEVFCISGWLAIALAKNIIWLDLGRFFVGIGVGLLSYVVPVYIAEITPKTVRGTFTFSNQLLQNCGVATAYYLGNFMSWRIIALIGILPCLIQLVGLFFVPESPRWLAK 208          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: EDL15_ARATH (Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.873e-42
Identity = 81/172 (47.09%), Postives = 116/172 (67.44%), Query Frame = 1
Query:  256 GPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            G   FG   GYS+PTQ  I+ DL L+I+++S+FGS+  VG ++GA+  G++ + +GR  ++ I  +  +IGW  I+F+K    L +GRLL+G  +G+  Y  PVYI EIAP+N+RG+  S  QL   +GI + Y LG  V WR LA+LG +P  +++P LFFIPESPRWLAK
Sbjct:   41 GAFAFGCIIGYSAPTQTSIMKDLNLSIADYSLFGSILTVGLILGALICGKLTDLVGRVKTIWITNILFVIGWFAIAFAKGVWLLDLGRLLQGISIGISVYLGPVYITEIAPRNLRGAASSFAQLFAGVGISVFYALGTIVAWRNLAILGCIPSLMVLPLLFFIPESPRWLAK 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: EDL11_ARATH (Sugar transporter ERD6-like 11 OS=Arabidopsis thaliana GN=At3g05165 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.873e-42
Identity = 82/168 (48.81%), Postives = 115/168 (68.45%), Query Frame = 1
Query:  268 FGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            +G   GY+S  +  I+ +L L++++FS FGS  NVG  VGA+ SGQ+A  +GR+ +L       + GWL I+F+K+  +L +GR+  G GVG+ISY VPVYIAEI P+++RG+  + NQL    G+ L Y  G  +NWRV+AV+G +PC L   G+FFIPESPRWLAK
Sbjct:   44 YGCAAGYTSGAETAIMKELDLSMAQFSAFGSFLNVGGAVGALFSGQLAVILGRRRTLWACDFFCVFGWLSIAFAKNVFWLDLGRISLGIGVGLISYVVPVYIAEITPKHVRGAFTASNQLLQNSGVSLIYFFGTVINWRVMAVIGAIPCILQTIGIFFIPESPRWLAK 211          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ERD6_ARATH (Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 1.852e-41
Identity = 79/167 (47.31%), Postives = 118/167 (70.66%), Query Frame = 1
Query:  271 GFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            G   G+SS  QA I  DL L+++E+S+FGS+  +G ++GA+ SG++A+ +GRK +++      I GWL ++ ++++ +L  GRLL G GVG+ SY +PVYIAEIAP+++RGS    NQL    GI L +++G F+ WR+L V+G++PC   +  LFFIPESPRWLAK
Sbjct:   73 GCGVGFSSGAQAGITKDLSLSVAEYSMFGSILTLGGLIGAVFSGKVADVLGRKRTMLFCEFFCITGWLCVALAQNAMWLDCGRLLLGIGVGIFSYVIPVYIAEIAPKHVRGSFVFANQLMQNCGISLFFIIGNFIPWRLLTVVGLVPCVFHVFCLFFIPESPRWLAK 239          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: EDL10_ARATH (Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.561e-40
Identity = 80/168 (47.62%), Postives = 114/168 (67.86%), Query Frame = 1
Query:  268 FGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            +G   GY+S  +  I+ +L L++++FS FGS  N+G  VGA+ SGQ+A  +GR+ +L    +  I GWL I+F+K+  +L +GR+  G GVG+ SY VPVYIAEI P+++RG+  +   L    GI L Y  G  +NWRVLAV+G LPC + + G++FIPESPRWLAK
Sbjct:   35 YGCANGYTSGAETAIMKELDLSMAQFSAFGSFLNLGGAVGALFSGQLAVILGRRRTLWACDLFCIFGWLSIAFAKNVLWLDLGRISLGIGVGLTSYVVPVYIAEITPKHVRGAFSASTLLLQNSGISLIYFFGTVINWRVLAVIGALPCFIPVIGIYFIPESPRWLAK 202          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: EDL13_ARATH (Putative sugar transporter ERD6-like 13 OS=Arabidopsis thaliana GN=At3g20460 PE=3 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.861e-39
Identity = 74/172 (43.02%), Postives = 115/172 (66.86%), Query Frame = 1
Query:  256 GPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            G   +G   G++SP Q  I++ L L+++EFS FG++  +G +VGA  SG++A+  GR+G+L ++    + GWL+I+FS+ +  L +GRL  G   GV SY VPVYI EIAP+ +RG+  ++N L +   + + YLLG  ++W+ LA++  +PC     GLFFIPESPRWL++
Sbjct:   63 GTFSYGTAAGFTSPAQTGIMAGLNLSLAEFSFFGAVLTIGGLVGAAMSGKLADVFGRRGALGVSNSFCMAGWLMIAFSQATWSLDIGRLFLGVAAGVASYVVPVYIVEIAPKKVRGTFSAINSLVMCASVAVTYLLGSVISWQKLALISTVPCVFEFVGLFFIPESPRWLSR 234          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ERDL1_ARATH (Sugar transporter ERD6-like 1 OS=Arabidopsis thaliana GN=SUGTL4 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 5.043e-39
Identity = 81/171 (47.37%), Postives = 111/171 (64.91%), Query Frame = 1
Query:  256 GPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLA 768
            G   +G    YSSP Q++I+ +L L+++++S F S+  +G M+ A  SG+IA  IGR+ ++ IA V  I GWL ++F+ D   L +GR   GFGVG+ISY VPVYIAEI P+  RG     NQL  + GI L +  G F +WR LA+L  +PC + +  LFFIPESPRWLA
Sbjct:   37 GSFVYGCAMSYSSPAQSKIMEELGLSVADYSFFTSVMTLGGMITAAFSGKIAAVIGRRQTMWIADVFCIFGWLAVAFAHDKMLLNIGRGFLGFGVGLISYVVPVYIAEITPKAFRGGFSFSNQLLQSFGISLMFFTGNFFHWRTLALLSAIPCGIQMICLFFIPESPRWLA 207          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ERDL2_ARATH (Sugar transporter ERD6-like 2 OS=Arabidopsis thaliana GN=SUGTL3 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.503e-38
Identity = 78/171 (45.61%), Postives = 110/171 (64.33%), Query Frame = 1
Query:  256 GPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLA 768
            G   +G    YSSP Q++I+ +L L+++++S F S+  +G M+ A+ SG+I+  +GR+ ++ I+ V  I GWL ++F+ D   L  GRL  GFGVG+ISY VPVYIAEI P+  RG     NQL   +GI L +  G F +WR LA+L  +P    +  LFFIPESPRWLA
Sbjct:   35 GSFCYGCAMSYSSPAQSKIMEELGLSVADYSFFTSVMTLGGMITAVFSGKISALVGRRQTMWISDVCCIFGWLAVAFAHDIIMLNTGRLFLGFGVGLISYVVPVYIAEITPKTFRGGFSYSNQLLQCLGISLMFFTGNFFHWRTLALLSAIPSAFQVICLFFIPESPRWLA 205          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR8_HUMAN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=2 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 4.572e-32
Identity = 77/176 (43.75%), Postives = 108/176 (61.36%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPT----QAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            ALGP+ FGF  GYSSP     Q       +L  +  S FG++  +GA  G +  G + +  GRK SL++ +VP + G+ +I+ ++D   L  GRLL G   GV S   PVYI+EIA   +RG LGS  QL V +GI+LAYL G  + WR LAVLG +P +L++  + F+PE+PR+L
Sbjct:   34 ALGPLSFGFALGYSSPAIPSLQRAAPPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVPFVAGFAVITAAQDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVVGILLAYLAGWVLEWRWLAVLGCVPPSLMLLLMCFMPETPRFL 209          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
EDL17_ARATH1.282e-4247.09Sugar transporter ERD6-like 17 OS=Arabidopsis thal... [more]
ERDL9_ARATH2.188e-4249.40Sugar transporter ERD6-like 9 OS=Arabidopsis thali... [more]
EDL15_ARATH4.873e-4247.09Sugar transporter ERD6-like 15 OS=Arabidopsis thal... [more]
EDL11_ARATH4.873e-4248.81Sugar transporter ERD6-like 11 OS=Arabidopsis thal... [more]
ERD6_ARATH1.852e-4147.31Sugar transporter ERD6 OS=Arabidopsis thaliana GN=... [more]
EDL10_ARATH4.561e-4047.62Sugar transporter ERD6-like 10 OS=Arabidopsis thal... [more]
EDL13_ARATH3.861e-3943.02Putative sugar transporter ERD6-like 13 OS=Arabido... [more]
ERDL1_ARATH5.043e-3947.37Sugar transporter ERD6-like 1 OS=Arabidopsis thali... [more]
ERDL2_ARATH2.503e-3845.61Sugar transporter ERD6-like 2 OS=Arabidopsis thali... [more]
GTR8_HUMAN4.572e-3243.75Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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