CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.741e-23
Identity = 57/175 (32.57%), Postives = 96/175 (54.86%), Query Frame = 1
Query:  262 IQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-------VNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            I  G+  G  S     I  DLKL+  +  I   + N+ +++G+ A+G+ +++IGR+ ++++A      G L++ F+ +  F+ +GR + G GVG      PVY  E+AP + RG L S  ++ + IGI+L Y+   F       + WR +  +G +P   L  G+  +PESPRWL
Sbjct:   38 IILGYDIGVMSGAAIFIKDDLKLSDVQLEILMGILNIYSLIGSGAAGRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTTEVAPASSRGFLSSFPEIFINIGILLGYVSNYFFAKLPEHIGWRFMLGIGAVPSVFLAIGVLAMPESPRWL 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.741e-23
Identity = 58/175 (33.14%), Postives = 97/175 (55.43%), Query Frame = 1
Query:  262 IQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-------VNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            I  G+  G  S     I  DLKL+  +  I   + N+ ++VG+ A+G+ ++++GR+ ++++A      G L++ F+ +  F+ +GR + G GVG      PVY AE+AP + RG L S  ++ + IGI+L Y+   F       + WR +  +G +P   L  G+  +PESPRWL
Sbjct:   38 IILGYDIGVMSGASIFIKDDLKLSDVQLEILMGILNIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLGVGAVPSVFLAIGVLAMPESPRWL 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR1_DROME (Glucose transporter type 1 OS=Drosophila melanogaster GN=Glut1 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.970e-23
Identity = 70/194 (36.08%), Postives = 107/194 (55.15%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLT--------ISE------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LG +QFG+  G  +  +  I + +K          ISE      +S+  S+  +G M+G  + G +A   GRKG L++  V  I G  ++ F+K S     LF+GR + G   G+ +  VP+YI+EIAP N+RG LG+VNQL+VT+G++L+ +LG+         W +L  L + P  L +  L   PESPR+L
Sbjct:  267 LGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLYSVAVSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICPAILQLILLPVCPESPRYL 460          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.879e-23
Identity = 57/175 (32.57%), Postives = 101/175 (57.71%), Query Frame = 1
Query:  262 IQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL-------LGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            I FG+  G  S  Q  I  DLK+  ++  +   + N+ A+VG++ +G+ ++ IGR+ ++ ++AV  ++G +++ +  +   L +GR + G GVG      PVY AEI+  + RG L S+ +L +++GI+L Y+       L L + WR++  +   P  +L  G+  +PESPRWL
Sbjct:   34 IIFGYDTGVMSGAQIFIRDDLKINDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAPVYSAEISSASHRGFLTSLPELCISLGILLGYVSNYCFGKLTLKLGWRLMLGIAAFPSLILAFGITRMPESPRWL 208          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.642e-23
Identity = 67/179 (37.43%), Postives = 94/179 (52.51%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISEFSI---FGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G + FG+  G  S     I  D ++      +     S+A VGAM+GA A G I +Y GRK + + A V    G ++++ + D   L  GRLL G GVGV S T PVYIAE +P  +RG L S N L +T G  L+YL+          WR +  +  +P  +    + F+PESPRWL
Sbjct:   40 IGGLLFGYDTGVISGALLYIKDDFEVVKQSSFLQETIVSMALVGAMIGAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAPVYIAEASPSEVRGGLVSTNVLMITGGQFLSYLVNSAFTQVPGTWRWMLGVSGVPAVIQFILMLFMPESPRWL 218          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.474e-22
Identity = 56/175 (32.00%), Postives = 97/175 (55.43%), Query Frame = 1
Query:  262 IQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-------VNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            I FG+  G  S     I  DLK    +  +   + N+ A+VG++ +G+ ++ IGR+ ++++A++  ++G +++ +  +   L  GR   G GVG      PVY AEIA  + RG L S+  L ++IGI+L Y++  F       + WR++  +  +P  +L  G+  +PESPRWL
Sbjct:   29 IIFGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRTSDIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGLLASLPHLCISIGILLGYIVNYFFSKLPMHIGWRLMLGIAAVPSLVLAFGILKMPESPRWL 203          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.515e-22
Identity = 66/193 (34.20%), Postives = 101/193 (52.33%), Query Frame = 1
Query:  205 LRDGSXXXXXXXXXXALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL----LGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            LRD            A+  + FG   G  +     I     LT        S   +GA +GA+ +G ++  +GRK SLM  A+  ++G +  +F+     L   R++ G  VG+ SYT P+Y++E+A +N+RG + S+ QL VT+GI+LA+L         NWR +  +  LP  LLI  + F+P SPRWLA+
Sbjct:   15 LRDTRRMNMFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAE 207          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.515e-22
Identity = 66/193 (34.20%), Postives = 101/193 (52.33%), Query Frame = 1
Query:  205 LRDGSXXXXXXXXXXALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL----LGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            LRD            A+  + FG   G  +     I     LT        S   +GA +GA+ +G ++  +GRK SLM  A+  ++G +  +F+     L   R++ G  VG+ SYT P+Y++E+A +N+RG + S+ QL VT+GI+LA+L         NWR +  +  LP  LLI  + F+P SPRWLA+
Sbjct:   15 LRDTRRMNMFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAE 207          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.284e-22
Identity = 64/186 (34.41%), Postives = 104/186 (55.91%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFS---------IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            ALG + FG+  G +S     + S      + F+         + GSL   GA++G+I+   +A+++GR+  L+IAAV  ++G LI   + D + L +GRLL GFG+G+  +  P+YIAE  P  +RG+L S+ +L + +GI+L + +G F       WR +   G     L+  G++ +P SPRWL
Sbjct:  106 ALGGLLFGYDIGATSGATLSLQSPALSGTTWFNFSPVQLGLVVSGSL--YGALLGSISVYGVADFLGRRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGFSVGSFQIDVVGGWRYMYGFGTPVALLMGLGMWSLPASPRWL 289          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22
Identity = 54/138 (39.13%), Postives = 88/138 (63.77%), Query Frame = 1
Query:  370 VGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL----LGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            +GA +GA+ +G ++  +GRK SLM+ AV  + G +  +F+     L + R++ G  VG+ SYT P+Y++E+A +N+RG + S+ QL VT+GI++A+L         NWR +  +  LP  +LI  + F+P SPRWLA+
Sbjct:   70 LGAAIGALFNGWLSFRLGRKYSLMVGAVLFVAGSVGSAFATSVEMLLVARIVLGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVMAFLSDTAFSYSGNWRAMLGVLALPAVVLIILVIFLPNSPRWLAE 207          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
PLT2_ARATH1.741e-2332.57Putative polyol transporter 2 OS=Arabidopsis thali... [more]
PLT1_ARATH1.741e-2333.14Putative polyol transporter 1 OS=Arabidopsis thali... [more]
GTR1_DROME2.970e-2336.08Glucose transporter type 1 OS=Drosophila melanogas... [more]
PLT3_ARATH3.879e-2332.57Probable polyol transporter 3 OS=Arabidopsis thali... [more]
INT1_ARATH8.642e-2337.43Probable inositol transporter 1 OS=Arabidopsis tha... [more]
PLT6_ARATH1.474e-2232.00Probable polyol transporter 6 OS=Arabidopsis thali... [more]
ARAE_ECOLI2.515e-2234.20Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO572.515e-2234.20Arabinose-proton symporter OS=Escherichia coli O15... [more]
XYLL3_ARATH3.284e-2234.41D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]
ARAE_KLEOX7.316e-2239.13Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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