CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: MYCT_RAT (Proton myo-inositol cotransporter OS=Rattus norvegicus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22
Identity = 60/178 (33.71%), Postives = 95/178 (53.37%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL-GLFV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            ALG   FG+  G  S     +   ++L      +  S A   A V A+A G +   +GR+ ++++A+    +G  +++ + +   L  GRL+ G G+G+ S TVPVYIAE++P N+RG L ++N L +T G   A ++ G F       WR +  L  +P  +   G  F+PESPRWL
Sbjct:   59 ALGGFLFGYDTGVVSGAMLLLRRQMRLGAMWQELLVSGAVGAAAVAALAGGALNGALGRRSAILLASALCTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAIPAVIQFLGFLFLPESPRWL 236          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: MYCT_MOUSE (Proton myo-inositol cotransporter OS=Mus musculus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22
Identity = 60/178 (33.71%), Postives = 95/178 (53.37%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL-GLFV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            ALG   FG+  G  S     +   ++L      +  S A   A V A+A G +   +GR+ ++++A+    +G  +++ + +   L  GRL+ G G+G+ S TVPVYIAE++P N+RG L ++N L +T G   A ++ G F       WR +  L  +P  +   G  F+PESPRWL
Sbjct:   59 ALGGFLFGYDTGVVSGAMLLLRRQMRLGAMWQELLVSGAVGAAAVAALAGGALNGALGRRSAILLASALCTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAIPAVIQFLGFLFLPESPRWL 236          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HGT1_KLULA (High-affinity glucose transporter OS=Kluyveromyces lactis GN=HGT1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.780e-21
Identity = 62/179 (34.64%), Postives = 102/179 (56.98%), Query Frame = 1
Query:  262 IQFGFT-CGYSSPTQAEIISDLKLTISEFSIFGSLANV--GAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL---FVN----WRVLAVLGVLPCTLLIPGLFFIPESPRWLA 768
            + FGF     SS    ++  D        +  G  A++  G+ +G++ S   ++  GRK SL I A   IIG ++   ++D + L +GR++ G G+G  S   PVY +EI+P  +RG++  + Q SVT+GIM+ + +G    F++    +R+   L ++P  +L+ G+FFIPESPRWLA
Sbjct:   40 LMFGFDIASMSSMIGTDVYKDYFSNPDSLTYGGITASMAGGSFLGSLISPNFSDAFGRKVSLHICAALWIIGAILQCAAQDQAMLIVGRVISGMGIGFGSSAAPVYCSEISPPKIRGTISGLFQFSVTVGIMVLFYIGYGCHFIDGAAAFRITWGLQMVPGLILMVGVFFIPESPRWLA 218          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.631e-21
Identity = 56/179 (31.28%), Postives = 97/179 (54.19%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL-------LGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +L  +  G+  G  S     I  DLK+T  +  +     ++ ++ G++A G+ ++ IGRK ++ +AA+    G  +++ +     L +GR L G G+G+     PVYIAEI+P   RG   S  ++ + +GI+L Y+       L + ++WR++  +G+LP   +   L  IPESPRWL
Sbjct:   63 SLNNVLLGYDVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLFGSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVARGFFTSFPEIFINLGILLGYVSNYAFSGLSVHISWRIMLAVGILPSVFIGFALCVIPESPRWL 241          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: MYCT_HUMAN (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 60/178 (33.71%), Postives = 91/178 (51.12%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL-GLFV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            ALG   FG+  G  S     +   L L      +  S     A V A+A G +    GR+ ++++A+     G  +++ + +   L  GRL+ G G+G+ S TVPVYIAE++P N+RG L ++N L +T G   A ++ G F       WR +  L  +P  +   G  F+PESPRWL
Sbjct:   70 ALGGFLFGYDTGVVSGAMLLLKRQLSLDALWQELLVSSTVGAAAVSALAGGALNGVFGRRAAILLASALFTAGSAVLAAANNKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAVPAVIQFFGFLFLPESPRWL 247          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe GN=itr2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.380e-20
Identity = 57/175 (32.57%), Postives = 99/175 (56.57%), Query Frame = 1
Query:  268 FGFTCGYSSPTQAEIISDLKLTIS--EFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG-----LFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            FG+  G  S   A + SDL   +S  +  +  S  +  A++ A  SG +A+++GRK  L+ A    +IG +I++ S++ + + +GR + G+G+G+ S  VP+YI E+AP  +RG L  +  + +T G ++AY L      +   WR++  +G  P    +  LF+ PESPR+L +
Sbjct:   95 FGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITELAPARLRGRLVIIYVVFITGGQLIAYSLNAAFEHVHQGWRIMFGIGAAPALGQLISLFWTPESPRYLLR 269          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.802e-20
Identity = 60/179 (33.52%), Postives = 94/179 (52.51%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL-----GLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            ALG + FG+  G  S     I   + L   +     S   +GA++GA   G  ++  GR+  L+++A+   +G L  +FS +   L + R++ G  VG  S  +P Y+AE+AP + RG++ S+ QL V  GI+LAY+      G +  WR +     +P  LL  G   +PESPR+L K
Sbjct:   14 ALGGLLFGYDTGVISGAILFIQKQMNLGSWQQGWVVSAVLLGAILGAAIIGPSSDRFGRRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRGTVSSLFQLMVMTGILLAYITNYSFSGFYTGWRWMLGFAAIPAALLFLGGLILPESPRFLVK 192          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: INT4_ARATH (Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20
Identity = 65/180 (36.11%), Postives = 101/180 (56.11%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDL----KLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-FVN----WRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G + FG+  G  S     I  D     K T  + +I  S+A  GA+VGA   G I +  GR+ S++IA V  +IG ++++F+     + +GR+  GFGVG+ S T P+YI+E +P  +RG+L S N L +T G   +YL+ L FV+    WR +  +  +P  +    +  +PESPRWL
Sbjct:   36 IGGLLFGYDTGVISGALLFIKEDFDEVDKKTWLQSTIV-SMAVAGAIVGAAVGGWINDKFGRRMSILIADVLFLIGAIVMAFAPAPWVIIVGRIFVGFGVGMASMTSPLYISEASPARIRGALVSTNGLLITGGQFFSYLINLAFVHTPGTWRWMLGVAGVPAIVQFVLMLSLPESPRWL 214          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: PLST1_ARATH (Probable plastidic glucose transporter 1 OS=Arabidopsis thaliana GN=At1g05030 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.243e-20
Identity = 51/143 (35.66%), Postives = 81/143 (56.64%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN-----WRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            S+   GA +G+I +G + +  G + +  I  +P I+G L+ + +     +  GR L G G+GV +  VP+YI+E+AP   RGSLG++ Q+   +GI+ + LLG+        WR +  +  +P  LL  G+ F  ESPRWL K
Sbjct:  125 SIFIAGAFIGSIVAGPLVDKFGYRRTFQIFTIPLILGALVSAQAHSLDEILCGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQIGTCLGIIFSLLLGIPAEDDPHWWRTMLYVASMPGFLLALGMQFAVESPRWLCK 267          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20
Identity = 58/176 (32.95%), Postives = 95/176 (53.98%), Query Frame = 1
Query:  268 FGFTCGYSSPTQAEIISDLKL---TISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN-----WRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            FG+  G  +     I SDL     T++E  +  S+   GA +G++ SG +A+  GR+ +  I A+P I+G  +   S   + + +GR L G G+G+      +Y+ E++P  +RG+ GS  Q++  +G+M A  +G+ V+     WRV   L  +P  LL  G+F   ESP+WL K
Sbjct:   65 FGYHLGVVNEPLESISSDLGFSGDTLAE-GLVVSVCLGGAFLGSLFSGGVADGFGRRRAFQICALPMILGAFVSGVSNSLAVMLLGRFLVGTGMGLGPPVAALYVTEVSPAFVRGTYGSFIQIATCLGLMAALFIGIPVHNITGWWRVCFWLSTIPAALLALGMFLCAESPQWLFK 239          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
MYCT_RAT9.555e-2233.71Proton myo-inositol cotransporter OS=Rattus norveg... [more]
MYCT_MOUSE9.555e-2233.71Proton myo-inositol cotransporter OS=Mus musculus ... [more]
HGT1_KLULA2.780e-2134.64High-affinity glucose transporter OS=Kluyveromyces... [more]
PLT4_ARATH3.631e-2131.28Probable polyol transporter 4 OS=Arabidopsis thali... [more]
MYCT_HUMAN8.089e-2133.71Proton myo-inositol cotransporter OS=Homo sapiens ... [more]
ITR2_SCHPO1.380e-2032.57Myo-inositol transporter 2 OS=Schizosaccharomyces ... [more]
XYLT_LACBR1.802e-2033.52D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
INT4_ARATH3.074e-2036.11Inositol transporter 4 OS=Arabidopsis thaliana GN=... [more]
PLST1_ARATH5.243e-2035.66Probable plastidic glucose transporter 1 OS=Arabid... [more]
PLST2_ARATH6.848e-2032.95Probable plastidic glucose transporter 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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