CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20
Identity = 60/181 (33.15%), Postives = 97/181 (53.59%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLT-----ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G + FG+  G  S     I  D K       + E  +  S+A  GA+VGA   G   + +GR+ ++++A    ++G +I++ + + S L +GR+  G GVG+ S T P+YI+E +P  +RG+L S N   +T G  L+YL+ L        WR +  +  +P  L    +F +PESPRWL
Sbjct:   37 IGGLLFGYDTGVISGALLYIRDDFKSVDRNTWLQEMIV--SMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPAKIRGALVSTNGFLITGGQFLSYLINLAFTDVTGTWRWMLGIAGIPALLQFVLMFTLPESPRWL 215          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HGT1_CANAL (High-affinity glucose transporter OS=Candida albicans GN=HGT1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 1
Query:  370 VGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            +G+  G+IAS  ++E  GR+ SL+  A   ++G  I S  ++ + L +GR++ G GVG  S   PVY AE+AP+ +RG +G + Q  VT+GIM+ + L           ++R+   L ++P   L  G FFIPESPRWLAK
Sbjct:   80 LGSFFGSIASSFVSEPFGRRLSLLTCAFFWMVGAAIQSSVQNRAQLIIGRIISGIGVGFGSAVAPVYGAELAPRKIRGLIGGMFQFFVTLGIMIMFYLSFGLGHINGVASFRIAWGLQIVPGLCLFLGCFFIPESPRWLAK 220          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR5_HORSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Equus caballus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20
Identity = 58/163 (35.58%), Postives = 96/163 (58.90%), Query Frame = 1
Query:  304 AEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +E IS+  LT+  +SI  S+   G  VG++  G +   +GRKG+L+   + +I+  +++  SK +     + + RLL G   G+ S  VP+Y+ E++P+N+RG+LG V QL +T+GI++A ++GL         W +L  L  +P  L +  L F PESPR+L
Sbjct:   59 SEYISEFSLTLL-WSISVSMFPFGGFVGSLMVGPLVNRLGRKGTLLFNNIFSIVPAILMGTSKTARSYEMIILSRLLVGICAGLSSNVVPMYLGELSPKNLRGALGVVPQLFITVGILVAQIVGLRSLLATEEGWPILLGLTAIPAALQLLLLPFFPESPRYL 220          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR3_SHEEP (Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20
Identity = 62/194 (31.96%), Postives = 100/194 (51.55%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G  QFG+  G  +  +A I   L  T+ E              +S+  ++ +VG M+G+ + G      GR+ S++I  +  I G  ++ F K +     L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + IGI++A + GL V       W +L    +LP  +    L F PESPR+L
Sbjct:   19 IGSFQFGYNTGVINAPEAIIKDFLNYTLEERSETPPSSVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAIAGGCLMGFCKIAESVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKVILGTEDLWPLLLGFTILPAIIQCAALPFCPESPRFL 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20
Identity = 60/179 (33.52%), Postives = 100/179 (55.87%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLK---LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN-----WRVLAVLGVLPCTLLIPGLFFIPESPRW 762
            ++    FG+  GY S     I +DL    LT  E  I  +  ++GA++ +I +G  A+  GRK  LM + +  +IG ++   +     + +GRL+ GFGVG+ S   P++I+EIAP+ +RG L  +N L +T G ++AY  G  +N     WR+L  L ++P  +    L F+P++PR+
Sbjct:   94 SISGFMFGYDTGYISSALISIGTDLDHKVLTYGEKEIVTAATSLGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAPLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGWRILVGLSLIPTAVQFTCLCFLPDTPRY 272          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: INT3_ARATH (Probable inositol transporter 3 OS=Arabidopsis thaliana GN=INT3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19
Identity = 64/183 (34.97%), Postives = 100/183 (54.64%), Query Frame = 1
Query:  253 LGPIQFGFTCG-------YSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-FVN----WRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G + FG+  G       Y      E+  D K  + E  +  S+   GA+VGA   G   +  GR+ S++IA V  ++G L++  +     + +GRLL GFGVG+ S T P+YI+E++P  +RG+L S N L +T G  L+YL+ L FV+    WR +  +  +P  +    +  +PESPRWL
Sbjct:   35 IGGLLFGYNTGVIAGALLYIKEEFGEV--DNKTWLQEIIV--SMTVAGAIVGAAIGGWYNDKFGRRMSVLIADVLFLLGALVMVIAHAPWVIILGRLLVGFGVGMASMTSPLYISEMSPARIRGALVSTNGLLITGGQFLSYLINLAFVHTPGTWRWMLGVSAIPAIIQFCLMLTLPESPRWL 213          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR3_BOVIN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Bos taurus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.992e-19
Identity = 62/194 (31.96%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G  QFG+  G  +  +A I   L  T+ E              +S+  ++ +VG M+G+ + G      GR  S++I  +  I G  ++ F K +     L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + IGI++A + GL V       W +L    +LP  +    L F PESPR+L
Sbjct:   19 IGSFQFGYNTGVINAPEAIIKDFLNYTLEERSEPPPSSVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRGNSMLIVNLLAIAGGCLMGFCKIAESVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKVILGTEDLWPLLLGFTILPAIIQCAALPFCPESPRFL 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.399e-19
Identity = 57/179 (31.84%), Postives = 97/179 (54.19%), Query Frame = 1
Query:  250 ALGPIQFGFTCGYSSPTQAEIISDLK---LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN-----WRVLAVLGVLPCTLLIPGLFFIPESPRW 762
            ++    FG+  GY S     I  DL    LT  E  +  +  ++GA++ ++ +G  A+  GR+  LM + +  +IG ++   +     +  GRL+ GFGVG+ S   P++I+EIAP+ +RG L  +N L +T G ++AY  G  +N     WR+L  L ++P  L      F+P++PR+
Sbjct:  117 SISGFMFGYDTGYISSALISINRDLDNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGRLTVINSLWLTGGQLIAYGCGAGLNHVKNGWRILVGLSLIPTVLQFSFFCFLPDTPRY 295          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: YFIG_BACSU (Putative metabolite transport protein yfiG OS=Bacillus subtilis GN=yfiG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.439e-19
Identity = 60/183 (32.79%), Postives = 93/183 (50.82%), Query Frame = 1
Query:  256 GPIQFGFTCGYSS---PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN---------WRVLAVLGVLPCTLLIPGLFFIPESPRWLA 768
            G + FG+  G  +   P  A     L LT     +  S   +GA  GA+  G++++  GR+ +++  A+  I   L  +FS ++S +   R L G  VG  S TVP ++AEI+P   RG + + N+L + IG +LAY     +          WR + V+  LP  +L  G+  +PESPRWLA
Sbjct:   31 GGLLFGYDTGVINGALPFMATA-GQLNLTPVTEGLVASSLLLGAAFGAMFGGRLSDRHGRRKTILYLALLFIAATLGCTFSPNASVMIAFRFLLGLAVGCASVTVPTFLAEISPAERRGRIVTQNELMIVIGQLLAYTFNAIIGSTMGESANVWRYMLVIATLPAVVLWFGMLIVPESPRWLA 212          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR2_BOVIN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Bos taurus GN=SLC2A2 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.439e-19
Identity = 54/164 (32.93%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  301 QAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-FV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            + E ++   L    +S+  S   VG M+ +   G + + +GR  +L++A + +++G L++ FSK       +  GR + G   G+IS  +P+YI EIAP  +RG++G+++QL++  GI+++ ++GL F+      W +L  L  +P  L    LFF PESPR+L
Sbjct:   81 EEETMTSASLITMFWSLSVSSFAVGGMIASFFGGLLGDKLGRIKALLVANILSLVGALLMGFSKLGPSHILIISGRGISGLYCGLISGLIPMYIGEIAPTTLRGAIGALHQLAIVTGILISQIVGLDFILGNHELWHILLGLSAVPAILQCLLLFFCPESPRYL 244          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
INT2_ARATH6.848e-2033.15Probable inositol transporter 2 OS=Arabidopsis tha... [more]
HGT1_CANAL6.848e-2039.72High-affinity glucose transporter OS=Candida albic... [more]
GTR5_HORSE6.848e-2035.58Solute carrier family 2, facilitated glucose trans... [more]
GTR3_SHEEP6.848e-2031.96Solute carrier family 2, facilitated glucose trans... [more]
ITR1_YEAST8.944e-2033.52Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
INT3_ARATH1.168e-1934.97Probable inositol transporter 3 OS=Arabidopsis tha... [more]
GTR3_BOVIN1.992e-1931.96Solute carrier family 2, facilitated glucose trans... [more]
ITR2_YEAST3.399e-1931.84Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
YFIG_BACSU4.439e-1932.79Putative metabolite transport protein yfiG OS=Baci... [more]
GTR2_BOVIN4.439e-1932.93Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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