CF835377

Overview
NameCF835377
Unique NameCF835377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:1..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.154e-17
Identity = 46/142 (32.39%), Postives = 81/142 (57.04%), Query Frame = 1
Query:  349 IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN------WRVLAVLGVLPCTLLIPGLFFIPESP 756
            +F S   + A+  +  +  +    GRK S+ +  V  +IG L  +F+ + + L +GRLL G GVG  + + PVY++E+AP  +RG+L    Q+++TIGI++A L+    +      WRV   L  +P  +++ G F +P++P
Sbjct:   86 LFTSSLYLAALASSFVASAVTRKYGRKISMFVGGVAFLIGSLFNAFATNVAMLIVGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILIANLINYGTSQMAKNGWRVSLGLAAVPAVIMVIGSFVLPDTP 227          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HXT5_YEAST (Probable glucose transporter HXT5 OS=Saccharomyces cerevisiae GN=HXT5 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.426e-17
Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            S+ N+G  +G I   ++ +  GRK  LM   V   IG +I   S D  +  F+GR++ G GVG I+   P+ I+E++P+ +RG+L S  QL +T GI L Y            V WRV   L       +I G+ F+PESPR+L +
Sbjct:  141 SIFNIGCAIGGIVLSKLGDMYGRKIGLMTVVVIYSIGIIIQIASIDKWYQYFIGRIISGLGVGGITVLAPMLISEVSPKQLRGTLVSCYQLMITFGIFLGYCTNFGTKNYSNSVQWRVPLGLCFAWSIFMIVGMTFVPESPRYLVE 286          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR4_BOVIN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Bos taurus GN=SLC2A4 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.426e-17
Identity = 58/198 (29.29%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLT------------------ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            LG +QFG+  G  +  Q  I      T                   + +++  ++ +VG M+ +   G I++++GRK +++      ++G  ++  +K ++    L +GR   G   G+ S  VP+Y+ EIAP ++RG+LG++NQL++  GI++A +LGL         W +L  + VLP  L +  L   PESPR+L
Sbjct:   33 LGSLQFGYNIGVINAPQKVIEQSYNETWLGRQGPEGPGSIPPGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLFNNALAVLGGTLMGLAKAAASYEMLILGRFFIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVTGILIAQVLGLESMLGTATLWPLLLGITVLPALLQMVLLPLCPESPRYL 230          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HXT1_YEAST (Low-affinity glucose transporter HXT1 OS=Saccharomyces cerevisiae GN=HXT1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17
Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            S+ N+G  +G I   ++ +  GR+  L++  V   IG +I   S +  +  F+GR++ G GVG I+   P+ I+E+AP  MRG+L S  Q+ +T+GI L Y            V WRV   L       +I G+ F+PESPR+L +
Sbjct:  120 SIFNIGCAIGGIVLAKLGDMYGRRIGLIVVVVIYTIGIIIQIASINKWYQYFIGRIISGLGVGGITVLSPMLISEVAPSEMRGTLVSCYQVMITLGIFLGYCTNFGTKNYSNSVQWRVPLGLCFAWALFMIGGMMFVPESPRYLVE 265          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: HUP3_CHLKE (H(+)/hexose cotransporter 3 OS=Chlorella kessleri GN=HUP3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17
Identity = 55/150 (36.67%), Postives = 84/150 (56.00%), Query Frame = 1
Query:  340 EFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNII-GWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV-----NWRVLAVLGVLPCTLLIPGLFFIPESPRWLAK 771
            +  +F S   +  ++  I S  I    GRK S+ I  +  I  G L+ +F++D + L +GR+L GFGVG+ S  VP Y++E+AP + RG L    QL VTIGI++A L+   V      WR+   L  +P  +L+ G   +PESP +L +
Sbjct:   84 KLQLFVSSLFLAGLISCIFSAWITRNWGRKASMGIGGIFFIAAGGLVNAFAQDIAMLIVGRVLLGFGVGLGSQVVPQYLSEVAPFSHRGMLNIGYQLFVTIGILIAGLVNYGVRNWDNGWRLSLGLAAVPGLILLLGAIVLPESPNFLVE 233          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16
Identity = 51/181 (28.18%), Postives = 94/181 (51.93%), Query Frame = 1
Query:  256 GPIQFGFTCGYSSPTQAEIISDLKLTISEFS--IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN---------WRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            G + FG+  G  +     +    +L ++ F+  +  S    GA +GA+  G+++++ GR+ +++  AV   I  +  +F+ + + + + R + G  VG  S TVP Y+AE++P   RG + + N+L +  G +LA++    +          WR + V+  LP   L  G+  +PESPRWL
Sbjct:   21 GGLLFGYDTGVLNGALPYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNELMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFLFFGMIRMPESPRWL 201          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR14_HUMAN (Solute carrier family 2, facilitated glucose transporter member 14 OS=Homo sapiens GN=SLC2A14 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16
Identity = 57/194 (29.38%), Postives = 97/194 (50.00%), Query Frame = 1
Query:  253 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            +G  QFG+  G  +  +  I   +  T+++              +S+  ++ +VG M+G+ + G      GR+ S++I  +    G  ++   K +     L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + IGI++A + GL +       W VL    +LP  L    L   PESPR+L
Sbjct:   43 IGSFQFGYNTGVINAPETIIKEFINKTLTDKANAPPSEVLLTNLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAATGGCLMGLCKIAESVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLELILGSEELWPVLLGFTILPAILQSAALPCCPESPRFL 236          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR5_RABIT (Solute carrier family 2, facilitated glucose transporter member 5 OS=Oryctolagus cuniculus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.579e-16
Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = 1
Query:  307 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-----FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            E+I +  LT+  +S+  S+   G   G++  G +    GRKG+L+   + +I+  +++  SK +     + + RLL G   GV S  VP+Y+ E+AP+N+RG+LG  +QL +T+GI++A + GL        W +L  L   P     P   F PESPR+L
Sbjct:   61 ELIDEFPLTLL-WSVTVSMFPSGGFAGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSKVARSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVESQLFITLGILVAQIFGLRSIRQQKGWPILLGLTGGPAAAACPP--FFPESPRYL 218          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: GTR7_MOUSE (Solute carrier family 2, facilitated glucose transporter member 7 OS=Mus musculus GN=Slc2a7 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.062e-16
Identity = 48/144 (33.33%), Postives = 83/144 (57.64%), Query Frame = 1
Query:  358 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY------LLGLFVNWRVLAVLGVLPCTLLIPGLFFIPESPRW 762
            S+  +G ++G++  G +    GRKG+L+I  V  I   +++  SK +     + + R+L G   G+   T+P+Y+ E+APQN+RG+LG++ ++ V IG++LA       +LG    W +L  L  +P  + +  L F PESPR+
Sbjct:   82 SMFPLGGLLGSLVVGLMVNKWGRKGTLLINNVFAITSAVLMGVSKVARAFELIILSRVLVGICAGIAYSTLPMYLGELAPQNLRGALGTMTEVFVIIGVLLAQIFSLQAILGNATGWPILLALTGVPAVIQLLSLPFFPESPRY 225          
BLAST of CF835377 vs. ExPASy Swiss-Prot
Match: YB91_YEAST (Probable metabolite transport protein YBR241C OS=Saccharomyces cerevisiae GN=YBR241C PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.693e-16
Identity = 52/152 (34.21%), Postives = 77/152 (50.66%), Query Frame = 1
Query:  322 LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL----FVNWRVLAVLGVLPCTLLIPGLFFIPESPRWL 765
            + LT S++    S+ ++G + G+  +G  A   GRK   M A+   ++  L++ FS     L  GR L G   G      P++I EIAP   RG++GS+NQ+S+ +GI+L   L L      NWR L   G +     I     + ESPRWL
Sbjct:   80 IALTDSQYGAITSIFSIGGLFGSYYAGNWANRYGRKYVSMGASAMCMVSSLLLFFSNSYLQLLFGRFLVGMSCGTAIVITPLFINEIAPVEWRGAMGSMNQVSINLGILLTQTLALKYADSYNWRWLLFSGSVIAVANILAWLKVDESPRWL 231          
The following BLAST results are available for this feature:
BLAST of CF835377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
STP9_ARATH4.154e-1732.39Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
HXT5_YEAST5.426e-1736.30Probable glucose transporter HXT5 OS=Saccharomyces... [more]
GTR4_BOVIN5.426e-1729.29Solute carrier family 2, facilitated glucose trans... [more]
HXT1_YEAST9.255e-1734.93Low-affinity glucose transporter HXT1 OS=Saccharom... [more]
HUP3_CHLKE9.255e-1736.67H(+)/hexose cotransporter 3 OS=Chlorella kessleri ... [more]
IOLT_BACSU1.209e-1628.18Major myo-inositol transporter iolT OS=Bacillus su... [more]
GTR14_HUMAN1.209e-1629.38Solute carrier family 2, facilitated glucose trans... [more]
GTR5_RABIT1.579e-1634.16Solute carrier family 2, facilitated glucose trans... [more]
GTR7_MOUSE2.062e-1633.33Solute carrier family 2, facilitated glucose trans... [more]
YB91_YEAST2.693e-1634.21Probable metabolite transport protein YBR241C OS=S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01C07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835377 ID=CF835377; Name=CF835377; organism=Citrus sinensis; type=EST; length=771bp
ACGATCTCTTTGAAGCATTCCATCAAATCAATAATCATCCAAACACCAAC
ACCGTCTCCGTCGATCGTAAAGTAACGAGAGGCAATGAGTTTTAGAGACG
ATAATGAAGAAGCGGCTAATCTCCGTAAGCCGTTTCTCCACACGGGGAGT
TGGTACAAAATGGGCTCCAGACAGTCGAGTATCATGTCGTCATCGGCTCA
GATGCTTCGTGACGGCTCCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCG
CCCTCGGCCCCATCCAATTCGGTTTCACTTGTGGCTACTCTTCACCTACG
CAAGCCGAAATCATCAGCGATCTTAAACTTACAATTTCGGAGTTCTCTAT
ATTTGGCTCTTTAGCCAATGTGGGTGCTATGGTTGGTGCAATAGCTAGCG
GTCAGATAGCAGAGTACATTGGCCGAAAAGGGTCCCTAATGATTGCTGCT
GTTCCTAATATTATAGGATGGCTCATCATATCTTTCTCCAAAGATTCCTC
GTTTTTATTTATGGGAAGGTTGTTGGAAGGATTTGGTGTTGGTGTAATCT
CTTACACGGTGCCCGTGTACATAGCTGAGATAGCACCTCAAAATATGAGA
GGAAGTCTTGGATCTGTCAATCAGCTCTCAGTTACGATTGGAATTATGCT
GGCGTATCTATTGGGGCTTTTTGTCAATTGGAGAGTGCTTGCGGTTTTAG
GAGTTCTGCCATGTACATTGTTGATACCTGGATTGTTTTTCATACCAGAA
TCTCCTCGATGGCTGGCCAAA
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