CF835380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.088e-27 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = -2 Query: 231 AALKLVSALVLCMLVTGPLSAQA-ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 569 A L LV+ + +L+ GP + A I+CGQV+ +++PC+ + R G CC+GVRSLN+AA TT DR+TACNCLK A SI LN NAA +P CGVSIPY IS S DC V Sbjct: 4 AQLVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.727e-27 Identity = 66/119 (55.46%), Postives = 84/119 (70.59%), Query Frame = -2 Query: 228 MAALKLVSALV--LCMLV-TGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 572 MA+L+ VS LV +CM+V + P++ AI+CG VSG+L PC+ +L+ GGP P P CC GV+ LN AARTT DR+ ACNCLK +A SI L N A LPG CGV +PY ISTS +C +R Sbjct: 1 MASLR-VSCLVALMCMVVISAPMAEAAISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.652e-27 Identity = 65/117 (55.56%), Postives = 74/117 (63.25%), Query Frame = -2 Query: 228 MAALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNA--AGLPGACGVSIPYKISTSADCYKVR 572 MA V L+L + G +A AITCGQV L C+G+ R GG IP CC GVR+LN A+TTPDRQTACNCLK PSL LN A AG+PG CGV+IPY I DC KVR Sbjct: 1 MARSSAVCFLLLLAFLIG--TASAITCGQVDSDLTSCLGYARKGGVIPPGCCAGVRTLNNLAKTTPDRQTACNCLKSLVN--PSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.076e-27 Identity = 58/110 (52.73%), Postives = 74/110 (67.27%), Query Frame = -2 Query: 240 AALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADC 569 A +K ALV+CM+V PL A+AITCG V+ LAPCIG+L+ CC G++SLN+AA + DR+TAC CLK AA SI +N AA LP CGVS+PY IS + +C Sbjct: 5 AFVKFTCALVMCMMVAAPL-AEAITCGLVASKLAPCIGYLQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNC 113
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.076e-27 Identity = 57/111 (51.35%), Postives = 79/111 (71.17%), Query Frame = -2 Query: 228 KLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 560 K+ ++LCM+V P A+A+TCGQV+ LAPC+ +L+ GP+ CC GV++L +A+TT DR+TAC CLK AA +I ++LN AAG+P C V+IPYKIS S DC V+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.935e-27 Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = -2 Query: 228 KLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 560 K+ ++LCM+V P A+A+TCGQV+ LAPC+ +L+ GP+ CC GV+ L +A+TT DR+TAC CLK AA +I ++LN AAG+P C V+IPYKIS S DC V+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.354e-26 Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = -2 Query: 228 KLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 560 K+ ++LCM+V P A+A+TCGQV+ +LAPC+ +L + GP+ CC GV+ L A+TT DRQTAC CLK AA S L+L AA LP C V+IPYKIS S DC KV+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.143e-26 Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = -2 Query: 231 ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 500 ++CG V+ LAPCI +LRS GP+P+ CCNGV++L +A TT DR+TAC CL A++SI +N AAGLPG CGV+IPYKIS S +C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.143e-26 Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = -2 Query: 228 KLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 560 K+ +V CM+V P A++++CG+V+ LAPC+ +L GP+ CC GV+ L AA+T DR+TAC CLK AA SI ++ AAGLPG CGV+IPYKIS S DC V+ Sbjct: 6 KIACFVVFCMVVVAP-HAESLSCGEVTSGLAPCLPYLEGRGPLG-GCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.717e-26 Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = -2 Query: 228 LKLVSALVLCMLVTGPLSAQA-ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPS-LNLNNAAGLPGACGVSIPYKISTSADCYKVR 563 LKL + +++CMLVT P++++A I+CG V+GSL C +L GG IP CC+GV+ LN+ ARTT DRQ AC C++ AAR++ S LN AA LPGAC V I Y IS +C VR Sbjct: 5 LKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118 The following BLAST results are available for this feature:
BLAST of CF835380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835380 ID=CF835380; Name=CF835380; organism=Citrus sinensis; type=EST; length=594bpback to top |