CF835380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.506e-22 Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = -2 Query: 231 KLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP---CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 560 K V+A+++ L+ +A A+TCGQV LAPCI + + G + P CC+GVR+LN+AA TT DRQT C CLKQ ++ L + AG+P CGV+IPY IS S DC +V Sbjct: 8 KYVAAVMVVALLLAAPAASAVTCGQVVSMLAPCIMY--ATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = -2 Query: 240 KLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADC 560 K+++ L++ + + I CG V+ +LA C+ +L + GP+P CC GV+SL A+TTPDR+ C CLK A + I LN + A LP CGVSIPY IS S +C Sbjct: 6 KIITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNC 112
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21 Identity = 50/115 (43.48%), Postives = 74/115 (64.35%), Query Frame = -2 Query: 231 MAALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 572 MA + LV+ V+ V ++ A++CG V+ S+APC+ ++ P CC+GVR+LN A ++ DR+TAC+CLK A S +LN+ NAA +P CGVS+ + ISTS DC K+ Sbjct: 8 MALVALVA--VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21 Identity = 50/115 (43.48%), Postives = 74/115 (64.35%), Query Frame = -2 Query: 231 MAALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 572 MA + LV+ V+ V ++ A++CG V+ S+APC+ ++ P CC+GVR+LN A ++ DR+TAC+CLK A S +LN+ NAA +P CGVS+ + ISTS DC K+ Sbjct: 8 MALVALVA--VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21 Identity = 51/114 (44.74%), Postives = 75/114 (65.79%), Query Frame = -2 Query: 231 AALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPM-PCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 569 A + L++ ++ ML P +A AI CG V + PC+ +++ GGP P CC+GV++L+ AR+ DRQ+ACNCLK AR I +LN +NA +P CGV++PY IS + DC +V Sbjct: 1 AQVMLMAVALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20 Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = -2 Query: 264 MAALKLVSALVLCMLVT-GPLSAQA-ITCGQVSGSLAPCIGFLRSGG---PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSI-PSLNLNNAAGLPGACGVSIPY 572 MA L + LV ++ GP++A+A ++CG+V+ +L PC G+L +GG P P CCNGVR LN TT DR+ AC C+K AAR++ P LN + AAG+P CG+ IPY Sbjct: 1 MAGLMKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQ-CCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPY 108
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.229e-20 Identity = 54/118 (45.76%), Postives = 70/118 (59.32%), Query Frame = -2 Query: 231 SQMAALKL-VSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 578 ++ AA KL + ALV ML+ + AITCGQVS +L PC + + G P CC+GV+ L AR+T D+Q C CLK A + N AAG+P CGVS+PY IS S DC K+ Sbjct: 2 ARTAATKLALVALVAAMLLVA--ADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAY---NAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.772e-18 Identity = 40/108 (37.04%), Postives = 62/108 (57.41%), Query Frame = -2 Query: 228 LVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQA--ARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 545 L +C+++ A++C V L PC+ ++ GGP+P CCNG+ +L + A+T+ DRQ C C+K A ++ + NA LP CGV +PYK S S DC ++ Sbjct: 6 LAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.314e-18 Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = -2 Query: 231 LVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGG-PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 545 LV+ +L+ +AI C QV+ LA C+ +L++GG P PM CCNG+ SL AAA DRQ ACNCLK A +IP +N + A LP CGV+I S + DC + Sbjct: 14 LVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPM-CCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18 Identity = 45/111 (40.54%), Postives = 62/111 (55.86%), Query Frame = -2 Query: 228 LVLCMLVTGPL---SAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAAR--SIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 545 L LC+L+ S AI+C V +L PC+ ++ GG IP CCNG+R L+ A + D+Q C C+K S S+ L AA LPG CGV +PYKI S +C ++ Sbjct: 6 LPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116 The following BLAST results are available for this feature:
BLAST of CF835380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835380 ID=CF835380; Name=CF835380; organism=Citrus sinensis; type=EST; length=594bpback to top |