CF835380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.794e-18 Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = -2 Query: 228 AITCGQVSGSLAPCIGFLRSGGPIPMP--CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 503 A+TC V+ +L PC+ +L+ G P P CC GVRSL AAA+T DR+ ACNC+K AA+ SLN AA L CGV + Y +S + +C V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.794e-18 Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = -2 Query: 228 AITCGQVSGSLAPCIGFLRSGGPIPMP--CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 503 A+TC V+ +L PC+ +L+ G P P CC GVRSL AAA+T DR+ ACNC+K AA+ SLN AA L CGV + Y +S + +C V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.829e-16 Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = -2 Query: 240 KSQMAALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADC 581 K + +++ +V+ L+ P + AITC V+G+L PC+ +LRSGG CC G + L A RT DR+TAC C K AA + + + A+ LPG CG+S I+ + +C Sbjct: 2 KGTSMGVAILAMIVMAQLMVHP--SVAITCNDVTGNLTPCLPYLRSGGKPTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQL-KVRPDMASSLPGKCGISTSIPINPNVNC 112
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.027e-14 Identity = 46/120 (38.33%), Postives = 65/120 (54.17%), Query Frame = -2 Query: 231 KSQMAALKLVSALVLCMLVTGPLSAQ-AITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVS-IPYKISTSADCYKV 581 K + A+ +V +V M V G + + AI+C QV ++ PC +L P CC +R L++ + TPDRQ CNCLK A+S + L AA LPG C V+ + IS + DC KV Sbjct: 4 KKMVEAVFVVGLVVTMMNVWGAVPVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLKTQAKSY-GVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.027e-14 Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = -2 Query: 231 ITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 500 + CGQV+ SLA CI FL G P CC GV++L A T+ DR+ AC C+K AA P++ + A+ LP CGV I IS + +C + Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13 Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = -2 Query: 231 MAALKLVSAL-VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSG-GPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 572 M LK ++ + VL + S AI+C V L PC+ +L SG G P CC+GV+SL AA T+ D++ AC C+K A S+ ++ A L CG S+P S + DC V Sbjct: 1 MNVLKCLAIISVLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSV-TVKPELAQALASNCGASLPVDASPTVDCTTV 115
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 34/91 (37.36%), Postives = 52/91 (57.14%), Query Frame = -2 Query: 231 ITCGQVSGSLAPCIGFLRSGGPIP-MPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 500 + CGQV+ +L+ C+ FL P + CC GV L A T D++ AC C+K AA P++ + A+ LP CGV I IS + +C+++ Sbjct: 1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91 The following BLAST results are available for this feature:
BLAST of CF835380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835380 ID=CF835380; Name=CF835380; organism=Citrus sinensis; type=EST; length=594bpback to top |