CF835381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.425e-31 Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 3 Query: 30 ALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGP--IPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 +LKL ++LCM+V PL+ A+T GQV+ SL PCI +LR G +P CC G++SLN+AA+TTP RQ AC C+K AA I +N A+GLPG CGV+IPYKIS STDC+ V+ Sbjct: 6 SLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.425e-31 Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 3 Query: 30 ALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGP--IPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 +LKL ++LCM+V PL+ A+T GQV+ SL PCI +LR G +P CC G++SLN+AA+TTP RQ AC C+K AA I +N A+GLPG CGV+IPYKIS STDC+ V+ Sbjct: 2 SLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.220e-30 Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = 3 Query: 51 LLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRS--GGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 ++ +L T P + +TCGQV+G+L PC+G+LRS P+P+ CCN VR LN AARTT D++TAC CLKQ A ++ LNLN AAGLP CGV+IPYKIS +TDC++V Sbjct: 13 VMYMVLATTPNAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.220e-30 Identity = 61/114 (53.51%), Postives = 83/114 (72.81%), Query Frame = 3 Query: 33 LKLVSALLLCMLVTGPLSAQA-ITCGQVSGSLPPCIGFLRSGGP-IPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 +KL + CM+V GP+++ A ++CG VSG + PCIG+L P +P CC+GV SLN ARTTPDRQ AC CL AA ++P++N+ AAGLP ACGV+IPYKIS +T+C+ V+ Sbjct: 5 MKLACLIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.899e-30 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 3 Query: 36 KLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 K+ ++LCM+V P A+AITCGQV+ +L PC+ +LR+ GP+ CC GV++L +ARTT DRQ AC CLK AA +I +NL AAGLP CGV+IPYKIS STDCSKV+ Sbjct: 6 KIACFVVLCMVVAAPC-AEAITCGQVTSNLAPCLAYLRNTGPLGR-CCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.945e-30 Identity = 56/91 (61.54%), Postives = 72/91 (79.12%), Query Frame = 3 Query: 96 ITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 ITCGQVS +L PCI +++ GG +P CCNG+R++N ARTT DR+ ACNCLKQ + SIP +N NNAA LPG CGV++PYKIS ST+C+ V+ Sbjct: 1 ITCGQVSSNLAPCINYVKGGGAVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.435e-30 Identity = 62/118 (52.54%), Postives = 80/118 (67.80%), Query Frame = 3 Query: 21 QMAALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNN--AAGLPGACGVSIPYKISTSTDCSKVR 368 Q+ L + A++ CM V GP + A++CGQV +L PCI ++ +GG + CC GVRSL + A+TT DRQ+ CNCLKQA IP N N AAGLPG CGV+IPYKIS STDC ++ Sbjct: 6 QLLKLVCLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.439e-29 Identity = 59/111 (53.15%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 33 LKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 + ++ + CM+ + A AI+CGQV+ L PC G+L +GGP+P CCNGVR LN AA+TTPDRQTAC CLK + +NLNNA LPG CG+SI YKI+ + DCSK+ Sbjct: 6 MNVLCVAVACMVFSASY-ADAISCGQVTSGLVPCFGYLAAGGPVPPACCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.205e-29 Identity = 64/115 (55.65%), Postives = 79/115 (68.70%), Query Frame = 3 Query: 24 MAALKLVS-ALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 MA +LV AL+ +L+ P +A AITCGQV+ ++ PC+ + R G CC+GVRSL AAA TT DR+TACNCLK AAR I LN NAA +P CGVS+PY IS S DCS+V Sbjct: 1 MARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.205e-29 Identity = 64/115 (55.65%), Postives = 79/115 (68.70%), Query Frame = 3 Query: 24 MAALKLVS-ALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 MA +LV AL+ +L+ P +A AITCGQV+ ++ PC+ + R G CC+GVRSL AAA TT DR+TACNCLK AAR I LN NAA +P CGVS+PY IS S DCS+V Sbjct: 1 MARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115 The following BLAST results are available for this feature:
BLAST of CF835381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835381 ID=CF835381; Name=CF835381; organism=Citrus sinensis; type=EST; length=623bpback to top |