CF835381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28 Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 3 Query: 36 KLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 K+ +LLCM+V P A+A+TCGQV+ L PC+ +L+ GP+ CC GV+ L +A+TT DR+TAC CLK AA +I ++LN AAG+P C V+IPYKIS STDCS V+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27 Identity = 57/113 (50.44%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 30 ALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 AL+ + L+L + + + A AI+CG V+GSL PC +L GG +P CC GV++LN+ A+TTPDRQ AC C++ A+SI LN + A+GLPG CGVSIPY IS ST+C+ ++ Sbjct: 4 ALRFFTCLVLTVCIVASVDA-AISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27 Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 27 AALKLVSALLLCMLVTGPLSAQA-ITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 A L LV+ + +L+ GP + A I+CGQV+ ++ PC+ + R G CC+GVRSLN+AA TT DR+TACNCLK A SI LN NAA +P CGVSIPY IS S DCS V Sbjct: 4 AQLVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27 Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 27 AALKLVSALLLCMLVTGPLSAQA-ITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 A L LV+ + +L+ GP + A I+CGQV+ ++ PC+ + R G CC+GVRSLN+AA TT DR+TACNCLK A SI LN NAA +P CGVSIPY IS S DCS V Sbjct: 4 AQLVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.347e-27 Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 36 KLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 K+ +LLCM+V P A+A+TCGQV+ +L PC+ +L + GP+ CC GV+ L A+TT DRQTAC CLK AA S L+L AA LP C V+IPYKIS STDCSKV+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.759e-27 Identity = 63/116 (54.31%), Postives = 78/116 (67.24%), Query Frame = 3 Query: 24 MAALKLVS-ALLLCMLVTGPLSAQA-ITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 MA +LV AL+ +L+ GP + A I+CGQV+ ++ PC+ + R G CC+GVRSLN+AA TT DR+TACNCLK A SI LN NAA +P CGVSIPY IS S DCS V Sbjct: 1 MARAQLVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.684e-27 Identity = 57/113 (50.44%), Postives = 76/113 (67.26%), Query Frame = 3 Query: 27 AALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 A +K AL++CM+V PL A+AITCG V+ L PCIG+L+ CC G++SLN+AA + DR+TAC CLK AA SI +N AA LP CGVS+PY IS +T+C+ + Sbjct: 5 AFVKFTCALVMCMMVAAPL-AEAITCGLVASKLAPCIGYLQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.729e-27 Identity = 60/111 (54.05%), Postives = 76/111 (68.47%), Query Frame = 3 Query: 36 KLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 K+ +LLCM+V P A+A+TCGQV+ +L PC+ +L + GP+ CC GV+ L A+TT DRQ AC CLK AA S L+L AA LP C V+IPYKIS STDCSKV+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26 Identity = 61/114 (53.51%), Postives = 81/114 (71.05%), Query Frame = 3 Query: 33 LKLVSALLLCMLVTGPLSAQA-ITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPS-LNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 LKL + +++CMLVT P++++A I+CG V+GSL C +L GG IP CC+GV+ LN+ ARTT DRQ AC C++ AAR++ S LN AA LPGAC V I Y IS T+C+ VR Sbjct: 5 LKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.540e-26 Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 96 ITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 ++CG V+ L PCI +LRS GP+P+ CCNGV++L +A TT DR+TAC CL A++SI +N AAGLPG CGV+IPYKIS ST+C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90 The following BLAST results are available for this feature:
BLAST of CF835381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835381 ID=CF835381; Name=CF835381; organism=Citrus sinensis; type=EST; length=623bpback to top |