CF835381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.540e-26 Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 3 Query: 36 KLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 K+ ++ CM+V P A++++CG+V+ L PC+ +L GP+ CC GV+ L AA+T DR+TAC CLK AA SI ++ AAGLPG CGV+IPYKIS STDCS V+ Sbjct: 6 KIACFVVFCMVVVAP-HAESLSCGEVTSGLAPCLPYLEGRGPLG-GCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.390e-26 Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 96 ITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 +TCGQV G+L CIGFL+ GG +P CC GV+++ ++RTT DR+ C+CLK AA ++ +N NNA LPG CGV+IPYKISTST+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.651e-26 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 27 AALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPM-PCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 A + L++A L+ ML P +A A+ CGQV + PC+ +++ GGP P CCNGVR L+ A+++ DRQT CNCLK AR I +LNLNNAA +P C V++PY IS DCS++ Sbjct: 4 AQVLLMAAALVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.667e-25 Identity = 57/115 (49.57%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 30 ALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMP--CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 +LKL ++LC+LV PL+ AI+ QV SL PC+G++R P P C G+RSL +AAR DRQ AC C+K A I +N AAGLPG C V IPYKIS S DC +V+ Sbjct: 6 SLKLACVVVLCLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.105e-24 Identity = 54/117 (46.15%), Postives = 78/117 (66.67%), Query Frame = 3 Query: 18 SQMAALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 +Q+ + +V+A+LL + AI+CGQVS +L PCI + R +G P+ CC+GV+ L AA++T D+Q AC CLK A SI +N+ +G+PG CGVS+P+ IS STDC+KV Sbjct: 7 TQLVLVAMVAAMLLVA------TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 9.033e-24 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 3 Query: 96 ITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 ++CG V+ + CI +LR GP+P CCNGV++L +A TT DR+TAC CL A+++I +N AAGLP CGVSIPYKIS ST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.628e-23 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 3 Query: 18 SQMAALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 SQ+ + LV+A+LL + AI+CGQVS +L PCI + R +G P CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 7 SQLVLVALVAAMLLVA------ADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.855e-23 Identity = 55/118 (46.61%), Postives = 76/118 (64.41%), Query Frame = 3 Query: 18 SQMAALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 +Q+ + +V+A+LL + AI+CGQVS +L PCI + R +G P+ CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 7 TQLVLVAMVAAMLLVA------TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23 Identity = 52/93 (55.91%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 93 AITCGQVSGSLPPCIGFLRSGGPIPMPCC-NGVRSLNAAARTTPDRQTACNC-LKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 AI+CGQVS ++ PC+ + R G P C +GVRSLNAAARTT DR+ ACNC LK AA + LN A+ +PG CGV +PY IS S DCS+V Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23 Identity = 55/113 (48.67%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 36 KLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMP---CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 K V+A+++ L+ +A A+TCGQV L PCI + + G + P CC+GVR+LN+AA TT DRQT C CLKQ ++ L + AG+P CGV+IPY IS STDCS+V Sbjct: 8 KYVAAVMVVALLLAAPAASAVTCGQVVSMLAPCIMY--ATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118 The following BLAST results are available for this feature:
BLAST of CF835381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835381 ID=CF835381; Name=CF835381; organism=Citrus sinensis; type=EST; length=623bpback to top |