CF835381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23 Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 18 SQMAALKLVS-ALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 ++ AA +LV A++ ML+ + AI+CGQVS +L PCI + R +G P+ CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 2 ARAAATQLVLVAMVAAMLIVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.704e-22 Identity = 53/114 (46.49%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 27 AALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPM-PCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 A + L++ L+ ML P +A AI CG V + PC+ +++ GGP P CC+GV++L+ AR+ DRQ+ACNCLK AR I +LN +NA +P CGV++PY IS + DCS+V Sbjct: 1 AQVMLMAVALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.957e-22 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 36 KLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 K+++ L++ + + I CG V+ +L C+ +L + GP+P CC GV+SL A+TTPDR+ C CLK A + I LN + A LP CGVSIPY IS ST+C + Sbjct: 6 KIITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.460e-21 Identity = 49/115 (42.61%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 24 MAALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 MA + LV+ ++ V ++ A++CG V+ S+ PC+ ++ P CC+GVR+LN A ++ DR+TAC+CLK A S +LN+ NAA +P CGVS+ + ISTS DCSK+ Sbjct: 8 MALVALVA--VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.460e-21 Identity = 49/115 (42.61%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 24 MAALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 MA + LV+ ++ V ++ A++CG V+ S+ PC+ ++ P CC+GVR+LN A ++ DR+TAC+CLK A S +LN+ NAA +P CGVS+ + ISTS DCSK+ Sbjct: 8 MALVALVA--VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 52/116 (44.83%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 33 LKLVSALLLCMLVTGPLSAQA-ITCGQVSGSLPPCIGFLRSGG---PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSI-PSLNLNNAAGLPGACGVSIPY--KISTSTDCS 359 +KL + + ++ GP++A+A ++CG+V+ +L PC G+L +GG P P CCNGVR LN TT DR+ AC C+K AAR++ P LN + AAG+P CG+ IPY +I +T C+ Sbjct: 5 MKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQ-CCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20 Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 18 SQMAALKLVSALLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 365 +++A + LV+A+LL + AITCGQVS +L PC + + G P CC+GV+ L AR+T D+Q C CLK A + N AAG+P CGVS+PY IS S DCSK+ Sbjct: 7 TKLALVALVAAMLLVA------ADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAY---NAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.927e-19 Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 51 LLLCMLVTGPLSAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQA--ARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 L +C+++ A++C V L PC+ ++ GGP+P CCNG+ +L + A+T+ DRQ C C+K A ++ + NA LP CGV +PYK S STDC ++ Sbjct: 6 LAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.699e-19 Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 51 LLLCMLVTGPL---SAQAITCGQVSGSLPPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAAR--SIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 L LC+L+ S AI+C V +L PC+ ++ GG IP CCNG+R L+ A + D+Q C C+K S S+ L AA LPG CGV +PYKI ST+C+ ++ Sbjct: 6 LPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116
BLAST of CF835381 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.407e-18 Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 3 Query: 93 AITCGQVSGSLPPCIGFLRSGGPIPMP--CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 368 A+TC V+ +L PC+ +L+ G P P CC GVRSL AAA+T DR+ ACNC+K AA+ SLN AA L CGV + Y +S + +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94 The following BLAST results are available for this feature:
BLAST of CF835381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835381 ID=CF835381; Name=CF835381; organism=Citrus sinensis; type=EST; length=623bpback to top |