CF835592

Overview
NameCF835592
Unique NameCF835592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3618 contig Csv1_Contig3618:92..802. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14
Identity = 61/211 (28.91%), Postives = 98/211 (46.45%), Query Frame = 1
Query:  106 IPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKP-PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC---------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 705
            +P++     V ++V A +LN  +  +  GK++    PLP VPG D +G V  VG  V + K GD V          G    GS A++   ++  L   PK  D   AA LP+A  T+   LV R + S+G+                Q+ K V GA+ +A     EK++ ++SLG D  +D + E++     ++         DV++D +G
Sbjct:  100 VPEIKEDQ-VLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLV-RTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIEDLPDKY---------DVVFDAIG 299          
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: QOR_PSEAE (Quinone oxidoreductase OS=Pseudomonas aeruginosa GN=qor PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 59/192 (30.73%), Postives = 86/192 (44.79%), Query Frame = 1
Query:  133 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 705
            VRVR +A  LN+ +     G Y   P LP   GS+ +G V+AVG  V+ FKVGD V      LG++++  V  + +L  +P G D   AAA+ +   T+   L    +L  G+                Q  K  G  +I      EK +  +  G    +D S+E+V   V E    +K     V+YD VG
Sbjct:   31 VRVRNRAIGLNFIDTYYRSGLYPA-PGLPSGLGSEGAGEVEAVGSEVTRFKVGDRVAYATGPLGAYSELHVLAEEKLVHLPDGIDFEQAAAVMLKGLTTQYLLRQTYELRGGETILFHAAAGGVGLFACQWAKALGVQLIGTVSSPEKARLARQHGAWETIDYSHENVARRVLELTDGKK---CPVVYDSVG 218          
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 54/199 (27.14%), Postives = 93/199 (46.73%), Query Frame = 1
Query:  103 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 696
            PIP+ +    V ++V A  +N        G Y   P LP+ PG+D +G V+++G +VS FK GD V   + + G +A++ +A    ++ +P+  D    AA+ + + T+  AL H A+  +G+                QI +  G  ++  A   E  K +   G   V +  +   I  +K   K+   KGVDV+ +
Sbjct:   31 PIPKDHQ---VLIKVHACGINPVETYIRSGTYTRIPLLPYTPGTDVAGVVESIGNDVSAFKKGDRVFTTSTISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKVVLQNGAHEVFNHRDAHYIDEIK---KSIGEKGVDVIIE 223          
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: QOR_YEAST (Probable quinone oxidoreductase OS=Saccharomyces cerevisiae GN=ZTA1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 65/208 (31.25%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  103 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ-EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFI-VADQSELFPVPKGCD-----LLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 705
            P+P + S   + ++ K T +NY       G Y  EKP   +V G + SGTV A G  V+NF+VGD V  + +  +FAQ+  ++ Q  +  +PKG       L AA  L V    S     +  +   G                 Q+ K+ GA  IAVA   EK+K  K  G +++++ S E ++  V +F      KGVD  +D VG
Sbjct:   29 PVPSI-SEEELLIKNKYTGVNYIESYFRKGIYPCEKP---YVLGREASGTVVAKGKGVTNFEVGDQVA-YISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVK--KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNG---KGVDASFDSVG 226          
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: QORX_HUMAN (Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 51/193 (26.42%), Postives = 89/193 (46.11%), Query Frame = 1
Query:  133 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 708
            V ++V A++LN A+ +Q  G+Y   P    + G + SG V  +GP    ++K+GDT       G  AQ++   +  L P+P+G  L  AAA+P A+ T+   L     + +G                 Q+ ++ GA  +  A   +K++  + LG     +   E    +  +F K     GV+++ D +GG
Sbjct:   30 VLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKG---AGVNLILDCIGG 219          
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: MECR1_CAEEL (Probable trans-2-enoyl-CoA reductase 1, mitochondrial OS=Caenorhabditis elegans GN=W09H1.5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 60/207 (28.99%), Postives = 95/207 (45.89%), Query Frame = 1
Query:   94 KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 711
            KT  I    S+  V V+  A  +N A+  QI G Y  KP LP V G++  G V +VG NVS+ KVGD V    + LG++ +  +  +++LFP+     +  AA   V   T++  L     L  G                 QI ++ G   + V R  + ++ L    V  + DL  + VI   + + + +K  GV +  + VGG+
Sbjct:   35 KTVTIADKPSADQVLVQWIAAPINPADLNQIQGVYPVKPALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLSMEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQNGANSAVGKHVIQICRILGIKTVNVVRSRDNLEEL----VKELKDLGADEVITQEELYSRKKKFPGVKLALNCVGGR 237          
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: VAT1L_HUMAN (Synaptic vesicle membrane protein VAT-1 homolog-like OS=Homo sapiens GN=VAT1L PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 54/208 (25.96%), Postives = 87/208 (41.83%), Query Frame = 1
Query:   85 LLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 708
            L  K  P PQ      +++RVKA  LN+ + +   G     P  P VPG + SG V+A+G +V  +++GD V  F    ++A+ +      ++ +P       AAA P+ F T++V L   A L  G                 Q+        +       K + +K   V H+ D  N   +  VK        +GVD++ D + G
Sbjct:   58 LFRKAMPEPQ---DGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKD-SVTHLFD-RNADYVQEVKRI----SAEGVDIVLDCLCG 256          
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: VAT1L_MOUSE (Synaptic vesicle membrane protein VAT-1 homolog-like OS=Mus musculus GN=Vat1l PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11
Identity = 53/208 (25.48%), Postives = 86/208 (41.35%), Query Frame = 1
Query:   85 LLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 708
            L  K  P PQ      +++RVKA  LN+ + +   G     P  P VPG + SG V+A+G +V  +++GD V  F    ++A+ +      ++ +P       AAA P+ F T++  L   A L  G                 Q+        +       K + +K   V H+ D  N   +  VK        +GVD++ D + G
Sbjct:   56 LSRKAMPEPQ---DGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYTMLFEIANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKD-SVTHLFD-RNADYVQEVKRI----SAEGVDIVLDCLCG 254          
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: MCAS_MYCBO (Mycocerosic acid synthase OS=Mycobacterium bovis GN=mas PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 52/196 (26.53%), Postives = 84/196 (42.86%), Query Frame = 1
Query:  133 VRVRVKATSLNYANYLQILGKY----QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 708
            + V V  +S+N+A+ L   G++      +P L    G D+ G V AVG  V+  +VGD V GF+  G +  F+  D +    +P G     A     A  T+   L   AQ+ +G                  I +  GA I A A    K   L+ +GV+HV D  +   +   ++  +     GVD++ + + G
Sbjct: 1449 IEVAVSMSSINFADVLIAFGRFPIIDDREPQL----GMDFVGVVTAVGEGVTGHQVGDRVGGFSEGGCWRTFLTCDANLAVTLPPGLTDEQAITAATAHATAWYGLNDLAQIKAGDKVLIHSATGGVGQAAISIARAKGAEIFATAGNPAKRAMLRDMGVEHVYDSRS---VEFAEQIRRDTDGYGVDIVLNSLTG 1637          
BLAST of CF835592 vs. ExPASy Swiss-Prot
Match: ZADH2_HUMAN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 62/213 (29.11%), Postives = 92/213 (43.19%), Query Frame = 1
Query:   73 KSPILLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 708
            +  + LS+  P+P L     + VR +   +N ++     G+Y      PF  G +  G V A+G + S  + VG  V  + A GSFA++ V   S   PVP          L V+  T++++L     LS G+                Q+ K     +I      EK  FLKSLG D  ++   E     V   LK    +GVDV+Y+ VGG
Sbjct:   46 REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKP--EYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTE----PVGTVLKQEYPEGVDVVYESVGG 250          
The following BLAST results are available for this feature:
BLAST of CF835592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
QORL_ARATH4.884e-1428.91Quinone oxidoreductase-like protein At1g23740, chl... [more]
QOR_PSEAE1.421e-1330.73Quinone oxidoreductase OS=Pseudomonas aeruginosa G... [more]
QOR_CAVPO1.856e-1327.14Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ ... [more]
QOR_YEAST3.166e-1331.25Probable quinone oxidoreductase OS=Saccharomyces c... [more]
QORX_HUMAN5.400e-1326.42Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP5... [more]
MECR1_CAEEL5.400e-1328.99Probable trans-2-enoyl-CoA reductase 1, mitochondr... [more]
VAT1L_HUMAN2.052e-1225.96Synaptic vesicle membrane protein VAT-1 homolog-li... [more]
VAT1L_MOUSE1.018e-1125.48Synaptic vesicle membrane protein VAT-1 homolog-li... [more]
MCAS_MYCBO5.054e-1126.53Mycocerosic acid synthase OS=Mycobacterium bovis G... [more]
ZADH2_HUMAN8.621e-1129.11Zinc-binding alcohol dehydrogenase domain-containi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01I12_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01I12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835592 ID=CF835592; Name=CF835592; organism=Citrus sinensis; type=EST; length=711bp
TTGACTCGAACCCCGTTGGAGGCACTGGTGTGCAGGAAACTGGGCGATCC
AACCCTCTCAATTCACGATGAAAAATCGCCGATTCTGTTGAGTAAAACTG
AGCCAATTCCACAATTGAATTCTTCAACTGCAGTTAGAGTCAGAGTGAAA
GCCACCAGCTTGAACTACGCTAATTACTTGCAGATATTGGGGAAATATCA
AGAGAAACCACCATTGCCCTTCGTCCCCGGCTCCGATTATTCGGGCACTG
TTGATGCGGTGGGCCCCAATGTCTCAAATTTCAAAGTGGGTGACACTGTT
TGTGGATTTGCTGCCCTTGGCTCCTTTGCCCAATTCATCGTCGCTGATCA
GTCAGAATTGTTTCCAGTGCCAAAGGGATGTGATTTGTTGGCTGCTGCTG
CACTTCCTGTTGCATTTGGAACCTCACATGTTGCTCTTGTTCATCGGGCC
CAATTGTCCTCCGGTCAGGTCTTGCTTGTTCTTGGTGCTGCTGGAGGTGT
TGGTGTTGCCGCTGTTCAAATTGGCAAGGTTTGCGGAGCCACTATCATTG
CCGTTGCTAGGGGTGCTGAAAAGATAAAATTTTTGAAGTCATTGGGCGTC
GATCATGTAGTTGACTTGAGCAATGAGAGTGTCATTCCGAGTGTCAAAGA
GTTCCTCAAGGCAAGGAAACTCAAAGGGGTTGATGTTCTGTATGATCCTG
TTGGAGGCAAG
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