CF835597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835597 vs. ExPASy Swiss-Prot
Match: S15A4_MOUSE (Solute carrier family 15 member 4 OS=Mus musculus GN=Slc15a4 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.471e-12 Identity = 52/199 (26.13%), Postives = 93/199 (46.73%), Query Frame = -2 Query: 183 IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGR-----------RASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMRSIANSLLFCSFGFASYLSSLLITIV--HGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRY 740 +P + + + I L +P D ++ P LR+ H + L+RI +GM F + S AG++E R ++ + + ++W PQ +L+G E F I +EF P M+S L F G S++ S L+ +V + H D+ +I++ L Y++FL+A + G ++ FL + +Y Sbjct: 365 LPAAWLTMFDAVLILLLIPLKDKLVDPVLRR---HGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLDLVKEKTINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALVSLKAIGWMSSHTDF--GNINSCHLHYYFFLLAAIQGATLLLFLIVSVKY 558
BLAST of CF835597 vs. ExPASy Swiss-Prot
Match: S15A4_HUMAN (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.921e-12 Identity = 54/199 (27.14%), Postives = 94/199 (47.24%), Query Frame = -2 Query: 183 IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQ-----------VSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMRSIANSLLFCSFGFASYLSSLLITIV--HGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRY 740 +P + + + I L +P D ++ P LR+ H + L+RI +GM F + S AG++E R ++Q +S++W PQ +L+G E F I +EF P M+S L F G S++ S L+ +V + H D+ +I+ L+Y++FL+A + G ++ FL + +Y Sbjct: 364 LPAAWLTMFDAVLILLLIPLKDKLVDPILRR---HGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDF--GNINGCYLNYYFFLLAAIQGATLLLFLIISVKY 557
BLAST of CF835597 vs. ExPASy Swiss-Prot
Match: S15A4_RAT (Solute carrier family 15 member 4 OS=Rattus norvegicus GN=Slc15a4 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.509e-12 Identity = 52/199 (26.13%), Postives = 92/199 (46.23%), Query Frame = -2 Query: 183 IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGR-----------RASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMRSIANSLLFCSFGFASYLSSLLITIV--HGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRY 740 +P + + + I L +P D ++ P LR+ H + L+RI +GM F S AG++E R ++ + + ++W PQ +L+G E F I +EF P M+S L F G S++ S L+ +V + H D+ +I++ L Y++FL+A + G ++ FL + +Y Sbjct: 363 LPAAWLTMFDAVLILLLIPLKDKLVDPVLRR---HGLLPSSLKRIAVGMFFVTCSAFAAGILESKRLDLVKEKTINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALVSLKAIGWMSSHTDF--GNINSCHLHYYFFLLAAIQGATLLLFLIVSVKY 556
BLAST of CF835597 vs. ExPASy Swiss-Prot
Match: S15A4_XENLA (Solute carrier family 15 member 4 OS=Xenopus laevis GN=slc15a4 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.276e-12 Identity = 54/204 (26.47%), Postives = 95/204 (46.57%), Query Frame = -2 Query: 183 IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGI--TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQ-----------VSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMRSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGR-----LDYFYFLIAGLGGLNIVYFLYCARRY 740 +P + + + I + +P D ++ P L+K G+ + L+RI +GM F + S++ AG++E R + Q ++V+W PQ IL+G E F I +EF P M+S+ L F G S++ S L+ +V W++N D G L+Y++FL+A + ++ FL + +Y Sbjct: 365 LPAAWLTMFDAVLILILIPLKDKLVDPFLKK-----RGLLPSPLKRIAVGMFFVMCSVLAAGILESERLEIVKRDKIQQQIGNVTYYAANLTVWWQLPQYILIGISEIFASIAGLEFAYSAAPKSMQSVIMGLFFFFSGIGSFVGSGLLALV-----SIPQIGWMSNHSDLGNINGCTLNYYFFLLAAVQAATLLLFLIISVKY 558
BLAST of CF835597 vs. ExPASy Swiss-Prot
Match: S15A4_BOVIN (Solute carrier family 15 member 4 OS=Bos taurus GN=SLC15A4 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.124e-11 Identity = 53/192 (27.60%), Postives = 88/192 (45.83%), Query Frame = -2 Query: 183 WLPFYDTVLVPAL--------RKITKHEGGI-TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQ-----------VSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMRSIANSLLFCSFGFASYLSSLLITIV--HGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRY 692 WL +D VL+ L I K G + + L+RI +GM F + S AG++E R ++Q + ++W PQ +L+G E F I +EF P M+S L F G S++ S L+ +V + H D+ +I+ L+Y++FL+A + G ++ FL + +Y Sbjct: 361 WLTMFDAVLILLLIPLKDKLVDPILKRNGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLDLVKEKTINQTIGNVVYYAADLPIWWQVPQYVLIGVSEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSLKAIGWMSSHTDF--GNINGCYLNYYFFLLAAIQGATLLLFLIVSVKY 550 The following BLAST results are available for this feature:
BLAST of CF835597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835597 ID=CF835597; Name=CF835597; organism=Citrus sinensis; type=EST; length=801bpback to top |