CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.934e-19
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE+L ++ H ++V L+G C E +   L+YEY+ NG L  ++  ++G   L W  R QI  E A GL +LH      +VHRD
Sbjct:  610 EVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRD 691

HSP 2 Score: 51.9878 bits (123), Expect = 2.934e-19
Identity = 19/39 (48.72%), Postives = 33/39 (84.62%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T++AGTL Y+DPEY+ T  +  KSD+Y+FG+++L+++T+
Sbjct:  727 TVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITN 765
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.934e-19
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE+L ++ H ++V L+G C + +   L+YEY+ NG L++ +  + G   L W  R QI  E A GL +LHN    P+VHRD
Sbjct:  609 EVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRD 690

HSP 2 Score: 51.9878 bits (123), Expect = 2.934e-19
Identity = 20/39 (51.28%), Postives = 33/39 (84.62%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T++AGT  Y+DPEY+RT  +  KSD+Y+FGV++L+++T+
Sbjct:  725 TVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTN 763
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.934e-19
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE+L ++ H ++V L+G C E +   L+YEY+ NG L++++  + G   L W  R +I  E A GL +LHN     +VHRD
Sbjct:  621 EVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRD 702

HSP 2 Score: 52.7582 bits (125), Expect = 2.934e-19
Identity = 20/39 (51.28%), Postives = 33/39 (84.62%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T++AGT+ Y+DPEY+RT  +  KSD+Y+FGV++L ++T+
Sbjct:  737 TVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITN 775
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 2.940e-19
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKP-ALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +LSQI H HVV LLG C   E+  LVYE++ NG+L  +I+ +      + W +R +I  ++A  L++LH++   PI HRD
Sbjct:  488 EVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRD 570

HSP 2 Score: 50.0618 bits (118), Expect = 2.940e-19
Identity = 20/42 (47.62%), Postives = 32/42 (76.19%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T+++GT+ Y+DPEY+R+     KSD+Y+FGVI+ +L+T   P
Sbjct:  604 TVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKP 645
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.814e-19
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V++L ++ H ++V L+G C E +   L+YE++ NG L  ++  + GKP + W  R +I  E A GL +LH     P+VHRD
Sbjct:  624 EVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRD 705

HSP 2 Score: 50.8322 bits (120), Expect = 3.814e-19
Identity = 18/39 (46.15%), Postives = 32/39 (82.05%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T++AGT  Y+DPEY+ T  +  KSD+Y+FG+++L+++T+
Sbjct:  740 TVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITN 778
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.822e-19
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKP-ALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +LSQI H HVV LLG C   E+  LVYE++ NG+L  +I+ +      + W +R +I  ++A  L++LH+S   PI HRD
Sbjct:  497 EVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRD 579

HSP 2 Score: 48.521 bits (114), Expect = 3.822e-19
Identity = 19/42 (45.24%), Postives = 32/42 (76.19%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T+++GT+ Y+DPEY+++     KSD+Y+FGVI+ +L+T   P
Sbjct:  613 TVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKP 654
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.954e-19
Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 2 
Query:   83 FPSNLQVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            F    ++E+LS++ H +VV LLG C   +   LVYEY+ NGSL D +  +NG   L W  R +I      GLA+LH     PI+HRD + + +  D
Sbjct:  673 FEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK-LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLD 767

HSP 2 Score: 49.2914 bits (116), Expect = 4.954e-19
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T + GT+ Y+DPEY+ T  +  KSD+Y FGV++L+LLT   P
Sbjct:  793 TQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSP 834
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.961e-19
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQN--GKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+LS++RH H+V L+G C E N   LVYEY+ +G+L+D+++ ++    P L W  R +I    A GL +LH      I+HRD
Sbjct:  563 ELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRD 646

HSP 2 Score: 47.7506 bits (112), Expect = 4.961e-19
Identity = 20/42 (47.62%), Postives = 31/42 (73.81%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T++ GT  Y+DPEY+R   +  KSD+Y+FGV++L++L  C P
Sbjct:  682 TVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVL-CCRP 722
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 6.439e-19
Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 2 
Query:   80 KFPSNL-----QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++PSN      ++E +  IRH ++V L G    P  N L Y+Y+ENGSL D ++    K  L W  R +I    A GLA+LH+     I+HRD
Sbjct:  684 QYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRD 776

HSP 2 Score: 53.1434 bits (126), Expect = 6.439e-19
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 3 
Query:  354 YRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            Y  T + GT+ Y+DPEY RT  +  KSD+Y+FG+++L+LLT
Sbjct:  807 YASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLT 847
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.368e-19
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEINC--LVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            +VE L +IRH ++V L   C   +C  LVYEY+ NGSL D ++   G   L W  RF+II + A GL++LH+    PIVHRD + + +  D
Sbjct:  735 EVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGG-MLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILID 824

HSP 2 Score: 43.1282 bits (100), Expect = 8.368e-19
Identity = 18/42 (42.86%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            +++AG+  Y+ PEY  T  +  KSD+Y+FGV+IL+++T   P
Sbjct:  851 SVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRP 892
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
MEE39_ARATH2.934e-1939.02Probable LRR receptor-like serine/threonine-protei... [more]
Y5188_ARATH2.934e-1940.24Probable LRR receptor-like serine/threonine-protei... [more]
Y5181_ARATH2.934e-1939.02Probable LRR receptor-like serine/threonine-protei... [more]
WAKLM_ARATH2.940e-1940.96Wall-associated receptor kinase-like 17 OS=Arabido... [more]
Y5596_ARATH3.814e-1937.80Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH3.822e-1942.17Wall-associated receptor kinase-like 18 OS=Arabido... [more]
Y5977_ARATH4.954e-1939.58Probable leucine-rich repeat receptor-like protein... [more]
Y5900_ARATH4.961e-1940.48Putative receptor-like protein kinase At5g39000 OS... [more]
ERL2_ARATH6.439e-1938.71LRR receptor-like serine/threonine-protein kinase ... [more]
HSL1_ARATH8.368e-1942.86Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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