CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.428e-18
Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 2
Query:   95 LQVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPA-LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++VEV+ ++RH ++V LLG C E     LVY++++NG+LE +I+   G  + L W +R  II  +A GLA+LH      +VHRD
Sbjct:  197 VEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRD 280          

HSP 2 Score: 45.4394 bits (106), Expect = 2.428e-18
Identity = 19/47 (40.43%), Postives = 31/47 (65.96%), Query Frame = 3
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            + Y  T + GT  Y+ PEY  TG +  KSD+Y+FG++I++++T   P
Sbjct:  309 SSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNP 355          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.443e-18
Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGK------PALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            Q+ V+S+++H H V LLG C E N   L+Y++   GSL D ++ + G       P L W  R +I +  A GL FLH     PIVHRD
Sbjct:  117 QLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRD 204          

HSP 2 Score: 48.1358 bits (113), Expect = 2.443e-18
Identity = 23/51 (45.10%), Postives = 30/51 (58.82%), Query Frame = 3
Query:  336 TDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            +D       T + GT  Y  PEY  TG I  KSD+Y+FGV++L+LLT   P
Sbjct:  230 SDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 280          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.118e-18
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V++L ++ H ++V L+G C E +   LVYE+L NG L+ ++  + G   + W +R +I  E A GL +LH     P+VHRD
Sbjct:  608 EVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRD 689          

HSP 2 Score: 48.9062 bits (115), Expect = 3.118e-18
Identity = 18/39 (46.15%), Postives = 32/39 (82.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T +AGTL Y+DPE + +G +  KSD+Y+FG+++L+++T+
Sbjct:  724 TTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITN 762          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.118e-18
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE+L ++ H  +V L+G C + N   L+YE +  G+L++++  + G   L W +R +I  E A G+ +LH      IVHRD
Sbjct:  603 EVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRD 684          

HSP 2 Score: 53.9138 bits (128), Expect = 3.118e-18
Identity = 20/42 (47.62%), Postives = 34/42 (80.95%), Query Frame = 3
Query:  351 EYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            E + T++AGT  Y+DPEYH+T  +  KSD+Y+FGV++L++++
Sbjct:  714 EAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIIS 755          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.267e-18
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEINC---LVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+LS++RH H+V L+G C E NC   LVY+Y+ +G++ +++Y +   P+LPW  R +I    A GL +LH      I+HRD
Sbjct:  581 EIEMLSKLRHRHLVSLIGYCEE-NCEMILVYDYMAHGTMREHLY-KTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRD 661          

HSP 2 Score: 41.9726 bits (97), Expect = 5.267e-18
Identity = 16/37 (43.24%), Postives = 26/37 (70.27%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            T++ G+  Y+DPEY R   +  KSD+Y+FGV++ + L
Sbjct:  696 TVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAL 732          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.284e-18
Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +LSQI H HVV LLG C   E+  LVYE++ NG+L  +++ +       W VR +I  +++   ++LH +   PI HRD
Sbjct:  498 EVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRD 579          

HSP 2 Score: 47.3654 bits (111), Expect = 5.284e-18
Identity = 18/42 (42.86%), Postives = 32/42 (76.19%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T+++GT+ Y+DPEY+ +     KSD+Y+FGV++++L+T   P
Sbjct:  613 TVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKP 654          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 5.286e-18
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V VL+QI H ++V LLG C   E+  LVYE++ NG L   ++ ++    + W VR  I  E+A  L++LH++   PI HRD
Sbjct:  460 EVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRD 541          

HSP 2 Score: 46.9802 bits (110), Expect = 5.286e-18
Identity = 20/43 (46.51%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN 491
            T +AGT  Y+DPEY ++     KSD+Y+FGV++++LLT   P+
Sbjct:  575 TQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPS 617          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 5.288e-18
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ +LSQI H ++V LLG C   E+  LVYEY+ NG L   ++ +     + W VR +I  E+A  L+++H++   PI HRD
Sbjct:  472 EIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRD 553          

HSP 2 Score: 47.3654 bits (111), Expect = 5.288e-18
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T++AGT  YMDPEY  +     KSD+Y+FGV++++L+T   P
Sbjct:  587 TLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKP 628          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.854e-18
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+LS++RH H+V L+G C E    CLVY+Y+  G+L +++Y+   KP L W  R +I    A GL +LH      I+HRD
Sbjct:  561 EIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTK-KPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRD 641          

HSP 2 Score: 43.1282 bits (100), Expect = 6.854e-18
Identity = 16/37 (43.24%), Postives = 27/37 (72.97%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            T++ G+  Y+DPEY R   +  KSD+Y+FGV++ ++L
Sbjct:  676 TVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEIL 712          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.868e-18
Identity = 33/92 (35.87%), Postives = 56/92 (60.87%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPALP-WFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            +V +LSQI H ++V LLG C E  +  LVYE++ NG+L ++++  +    +  W VR +I  ++A  L++LH++   PI HRD +   +  D
Sbjct:  477 EVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLD 568          

HSP 2 Score: 47.7506 bits (112), Expect = 6.868e-18
Identity = 18/38 (47.37%), Postives = 30/38 (78.95%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T+++GT+ YMDPEY ++     KSD+Y+FGV++ +L+T
Sbjct:  593 TVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELIT 630          
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
Y1154_ARATH2.428e-1841.67Probable serine/threonine-protein kinase At1g01540... [more]
Y2197_ARATH2.443e-1840.91Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
RLK7_ARATH3.118e-1837.80Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
Y1755_ARATH3.118e-1835.37Probable LRR receptor-like serine/threonine-protei... [more]
FERON_ARATH5.267e-1840.96Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
WAKLL_ARATH5.284e-1839.02Putative wall-associated receptor kinase-like 13 O... [more]
WAKLB_ARATH5.286e-1840.24Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAKLC_ARATH5.288e-1839.02Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
ANX1_ARATH6.854e-1841.46Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
WAKLJ_ARATH6.868e-1835.87Wall-associated receptor kinase-like 10 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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