CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.152e-17
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEINC--LVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V+ L  IRH ++V  LG C   N   L+Y+Y+ NGSL   ++ ++G  +L W VR++II   A GLA+LH+    PIVHRD
Sbjct:  839 EVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRD 920          

HSP 2 Score: 39.6614 bits (91), Expect = 1.152e-17
Identity = 17/40 (42.50%), Postives = 28/40 (70.00%), Query Frame = 3
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            +AG+  Y+ PEY  +  I  KSD+Y++GV++L++LT   P
Sbjct:  957 IAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQP 996          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.154e-17
Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQ-NGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE LS+ +HP++V LLG C   N   L+Y Y++NGSL+ +++ + +G P+L W  R +I    A GLA+LH S    I+HRD
Sbjct:  787 EVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRD 869          

HSP 2 Score: 43.8986 bits (102), Expect = 1.154e-17
Identity = 22/50 (44.00%), Postives = 29/50 (58.00%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS------CLPNG 494
            T L GTL Y+ PEY +      K D+Y+FGV++L+LLT       C P G
Sbjct:  903 TDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRG 952          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 65.0846 bits (157), Expect = 1.155e-17
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPA-LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            +VE LS+ +HP++VLL G C   N   L+Y Y+ENGSL+ +++ +N  PA L W  R +I    A GL +LH      I+HRD +   +  D +
Sbjct:  778 EVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDEN 871          

HSP 2 Score: 45.8246 bits (107), Expect = 1.155e-17
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLILIPKSCR 527
            T L GTL Y+ PEY +      K D+Y+FGV++L+LLT   P   + +  PK CR
Sbjct:  894 TDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRP---VDMCKPKGCR 945          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.157e-17
Identity = 31/93 (33.33%), Postives = 55/93 (59.14%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            +V++L ++ H ++V L+G C E     L+YEY+ NG+L+ ++  +N +  L W  R +I  E A GL +LH     P++HRD +   +  D++
Sbjct:  635 EVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNN 727          

HSP 2 Score: 48.1358 bits (113), Expect = 1.157e-17
Identity = 19/39 (48.72%), Postives = 32/39 (82.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T +AG+  Y+DPEY+RT  +  KSD+++FGV++L+++TS
Sbjct:  751 TNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITS 789          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.158e-17
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V++L ++ H ++V L+G C E +   L+YE+L  G L  ++  ++G   + W  R +I  E A GL +LH+    PIVHRD
Sbjct:  623 EVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRD 704          

HSP 2 Score: 49.6766 bits (117), Expect = 1.158e-17
Identity = 18/39 (46.15%), Postives = 33/39 (84.62%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T++AGT  Y+DPEY++T  +  KSD+Y+FG+++L+++T+
Sbjct:  739 TVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITN 777          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.507e-17
Identity = 36/83 (43.37%), Postives = 55/83 (66.27%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPK-PIVHRD 337
            +++VLS+IRH H+V L G C E +   LVYE++E G+L++++Y  N  P+L W  R +I    A GL +LH+S  +  I+HRD
Sbjct:  532 EIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSN-LPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRD 613          

HSP 2 Score: 44.2838 bits (103), Expect = 1.507e-17
Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 3
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            + GT  Y+DPEY +T  +  KSD+YAFGV++L++L
Sbjct:  649 IKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVL 683          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.512e-17
Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDH 367
            ++++LS + HP++V LLG C E     LVYEY+ NG+L +++    G   LPW +R  +  + A  +A+LH+S   PI HRD +   +  D+
Sbjct:  392 EIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGS-GLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDY 482          

HSP 2 Score: 41.2022 bits (95), Expect = 1.512e-17
Identity = 15/34 (44.12%), Postives = 26/34 (76.47%), Query Frame = 3
Query:  375 GTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            GT  Y+DP+YH+   +  KSD+Y+FGV++ +++T
Sbjct:  510 GTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIIT 543          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.515e-17
Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYH--QNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +LSQI H ++V LLG C   E+  LVYEY+ NG L   ++   ++    + W VR +I  E+A  L+++H++   PI HRD
Sbjct:  476 EVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRD 559          

HSP 2 Score: 47.7506 bits (112), Expect = 1.515e-17
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T++AGT  YMDPEY  +     KSD+Y+FGV++++L+T   P
Sbjct:  593 TLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKP 634          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.958e-17
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+LS++RH H+V L+G C E    CL+Y+Y+  G+L +++Y+   +P L W  R +I    A GL +LH      I+HRD
Sbjct:  565 EIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTK-RPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRD 645          

HSP 2 Score: 42.743 bits (99), Expect = 1.958e-17
Identity = 16/37 (43.24%), Postives = 27/37 (72.97%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            T++ G+  Y+DPEY R   +  KSD+Y+FGV++ ++L
Sbjct:  680 TVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVL 716          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.965e-17
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ +LSQI H +VV +LG C   E+  LVYE++ N +L D++++ +    + W VR  I  EVA  L++LH++   PI HRD
Sbjct:  434 EIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRD 515          

HSP 2 Score: 47.3654 bits (111), Expect = 1.965e-17
Identity = 21/46 (45.65%), Postives = 33/46 (71.74%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVL 500
            TI+ GT+ Y+DPEY ++     KSD+Y+FGV++++LLT   P  +L
Sbjct:  549 TIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLL 594          
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RCH1_ARATH1.152e-1743.90LRR receptor-like serine/threonine-protein kinase ... [more]
PSKR1_DAUCA1.154e-1743.37Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
PSKR1_ARATH1.155e-1739.36Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y4245_ARATH1.157e-1733.33Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH1.158e-1736.59Probable LRR receptor-like serine/threonine-protei... [more]
Y2232_ARATH1.507e-1743.37Probable receptor-like protein kinase At2g23200 OS... [more]
WAKLO_ARATH1.512e-1736.96Wall-associated receptor kinase-like 14 OS=Arabido... [more]
WAKLF_ARATH1.515e-1739.29Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
ANX2_ARATH1.958e-1739.02Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
WAKLG_ARATH1.965e-1740.24Wall-associated receptor kinase-like 8 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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