CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.327e-17
Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +L++++H ++V LLG C E +   LVYE++ N SL+ +I+ ++ +  L W VRF+II  +A GL +LH      I+HRD
Sbjct:  392 EVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRD 473          

HSP 2 Score: 42.3578 bits (98), Expect = 3.327e-17
Identity = 18/36 (50.00%), Postives = 27/36 (75.00%), Query Frame = 3
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            +AGT  YM PEY   G I  KSD+Y+FGV++L++++
Sbjct:  510 IAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMIS 545          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.298e-17
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V++L ++ H ++  L+G C EIN   L+YEY+ N +L DY+  +     L W  R +I  + A GL +LHN    PIVHRD
Sbjct:  617 EVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSF-ILSWEERLKISLDAAQGLEYLHNGCKPPIVHRD 697          

HSP 2 Score: 46.9802 bits (110), Expect = 4.298e-17
Identity = 17/38 (44.74%), Postives = 31/38 (81.58%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T++AG++ Y+DPEY+ T  +  KSD+Y+ GV++L+++T
Sbjct:  732 TVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVIT 769          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.299e-17
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++++LS++RH H+V L+G C E     LVYEY+ NG   D++Y +N  P L W  R +I    A GL +LH    + I+HRD
Sbjct:  569 EIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSP-LTWKQRLEICIGAARGLHYLHTGTAQGIIHRD 649          

HSP 2 Score: 41.9726 bits (97), Expect = 4.299e-17
Identity = 17/37 (45.95%), Postives = 26/37 (70.27%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            T + G+  Y+DPEY R   +  KSD+Y+FGV++L+ L
Sbjct:  683 TAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEAL 719          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-17
Identity = 35/84 (41.67%), Postives = 55/84 (65.48%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNG--KPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++  L Q+ HP++V L+G C   E   LVYE+++ GSLE++++ +    KP LPWF+R  +  + A GLAFLH S P  +++RD
Sbjct:  121 EINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKP-LPWFLRVNVALDAAKGLAFLH-SDPVKVIYRD 202          

HSP 2 Score: 40.817 bits (94), Expect = 4.374e-17
Identity = 17/41 (41.46%), Postives = 28/41 (68.29%), Query Frame = 3
Query:  354 YRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            Y  T + GT  Y  PEY  +G +  +SD+Y+FGV++L++L+
Sbjct:  234 YVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILS 274          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 5.573e-17
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGA--CPEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V  LS I+H +VV L  +  C +   LVYEY+ NGSL + ++ + G+  + W VR  +    A GL +LH+   +P++HRD
Sbjct:  733 EVATLSNIKHINVVKLFCSITCEDSKLLVYEYMPNGSLWEQLHERRGEQEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRD 814          

HSP 2 Score: 45.4394 bits (106), Expect = 5.573e-17
Identity = 20/54 (37.04%), Postives = 36/54 (66.67%), Query Frame = 3
Query:  330 IETDNIT-EYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            I+ D++  ++   ++ GTL Y+ PEY  T  +  KSD+Y+FGV++++L+T   P
Sbjct:  839 IQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKP 892          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.590e-17
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+LS++RH H+V L+G C E +   LVYEY+ NG L  ++Y  +  P L W  R +I    A GL +LH    + I+HRD
Sbjct:  554 EIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGAD-LPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRD 634          

HSP 2 Score: 42.3578 bits (98), Expect = 5.590e-17
Identity = 18/42 (42.86%), Postives = 29/42 (69.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T + G+  Y+DPEY R   +  KSD+Y+FGV+++++L  C P
Sbjct:  669 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVL-CCRP 709          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 7.259e-17
Identity = 30/84 (35.71%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNG--KPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++++LS++ H H++ LLG C E     LVYE++ +GSL ++++ +N   K  L W  R  I  + A G+ +LH     P++HRD
Sbjct:  558 ELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRD 641          

HSP 2 Score: 46.9802 bits (110), Expect = 7.259e-17
Identity = 19/35 (54.29%), Postives = 29/35 (82.86%), Query Frame = 3
Query:  372 AGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            AGTL Y+DPEY+R   +  KSD+Y+FGV++L++L+
Sbjct:  679 AGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILS 713          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 9.468e-17
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V VL+QI H ++V LLG C   E+  LVYE++ NG L   +  +     + W VR  I  E+A  L++LH++   PI HRD
Sbjct:  468 EVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRD 549          

HSP 2 Score: 46.2098 bits (108), Expect = 9.468e-17
Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN 491
            T +AGT  Y+DPEY ++     KSD+Y+FGV++++L+T   P+
Sbjct:  583 TQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPS 625          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 9.500e-17
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC---PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++SQ+ H ++V LLG     PE + LVYEY+ N SL DY++ +     L W  RF+II   A G+A+LH      I+HRD
Sbjct:  367 EVNLISQVDHKNLVKLLGCSITGPE-SLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRD 448          

HSP 2 Score: 43.8986 bits (102), Expect = 9.500e-17
Identity = 18/38 (47.37%), Postives = 29/38 (76.32%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T +AGTL YM PEY   G +  K+D+Y+FGV++++++T
Sbjct:  482 TAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVIT 519          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.224e-16
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEI--NCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+LS I+H ++V L         + L Y+YLENGSL D ++    K  L W  R +I +  A GLA+LH+     I+HRD
Sbjct:  692 ELEMLSSIKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRD 773          

HSP 2 Score: 50.0618 bits (118), Expect = 1.224e-16
Identity = 21/51 (41.18%), Postives = 35/51 (68.63%), Query Frame = 3
Query:  324 LCIETDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            LC+   + + Y    + GT+ Y+DPEY RT  +  KSD+Y++G+++L+LLT
Sbjct:  798 LCVSKSHTSTY----VMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLT 844          
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
CRK40_ARATH3.327e-1740.24Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
SIRK_ARATH4.298e-1740.24Senescence-induced receptor-like serine/threonine-... [more]
Y2214_ARATH4.299e-1741.46Probable receptor-like protein kinase At2g21480 OS... [more]
BIK1_ARATH4.374e-1741.67Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
IKU2_ARATH5.573e-1737.80Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
THE1_ARATH5.590e-1741.46Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
ACR4_ARATH7.259e-1735.71Serine/threonine-protein kinase-like protein ACR4 ... [more]
WAKLD_ARATH9.468e-1740.24Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
CRK3_ARATH9.500e-1742.17Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
ERECT_ARATH1.224e-1639.02LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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