CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.227e-16
Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++++LS++RH H+V L+G C E +   LVYE++ NG   D++Y +N  P L W  R +I    A GL +LH    + I+HRD
Sbjct:  570 EIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAP-LTWKQRLEICIGSARGLHYLHTGTAQGIIHRD 650          

HSP 2 Score: 41.9726 bits (97), Expect = 1.227e-16
Identity = 17/37 (45.95%), Postives = 26/37 (70.27%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            T + G+  Y+DPEY R   +  KSD+Y+FGV++L+ L
Sbjct:  684 TAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEAL 720          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.228e-16
Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQ-----NGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++++LS++RH H+V L+G C E     LVYEY+ NG L D++Y       N  P L W  R +I    A GL +LH    + I+HRD
Sbjct:  569 EIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRD 655          

HSP 2 Score: 41.2022 bits (95), Expect = 1.228e-16
Identity = 16/37 (43.24%), Postives = 26/37 (70.27%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            T + G+  Y+DPEY R   +  KSD+Y+FGV++ ++L
Sbjct:  689 TAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVL 725          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.070e-16
Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGK-PALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            ++ +LS I+H ++V LLG C E +   LVY ++ NGSL D +Y +  K   L W  R  I    A GLA+LH    + ++HRD +   +  DHS
Sbjct:  639 ELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHS 732          

HSP 2 Score: 43.1282 bits (100), Expect = 2.070e-16
Identity = 16/38 (42.11%), Postives = 29/38 (76.32%), Query Frame = 3
Query:  375 GTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            GT  Y+DPEY++T  +  KSD+++FGV++L++++   P
Sbjct:  760 GTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREP 797          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.073e-16
Identity = 31/82 (37.80%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE+L ++ H ++V L+G C E     L+YEY+ NG L+ ++  ++G   L W  R  I  E A GL +LH+     +VHRD
Sbjct:  617 EVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRD 698          

HSP 2 Score: 46.9802 bits (110), Expect = 2.073e-16
Identity = 18/39 (46.15%), Postives = 31/39 (79.49%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T + GT  Y+DPEY+RT  +  KSD+Y+FG+++L+++T+
Sbjct:  733 TGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITN 771          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.086e-16
Identity = 36/95 (37.89%), Postives = 58/95 (61.05%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN---CLVYEYLENGSLEDYIYHQNGKPA-LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            +VE+L+ +RHP++V L G   + +    LVYEY+ NG+L D+++     P+ LPW +R +I  E A  L +LH SK   I+HRD + + +  D +
Sbjct:  388 EVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLHASK---IIHRDVKSNNILLDQN 479          

HSP 2 Score: 39.2762 bits (90), Expect = 2.086e-16
Identity = 15/35 (42.86%), Postives = 26/35 (74.29%), Query Frame = 3
Query:  375 GTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            GT  Y+DP+YH    +  KSD+Y+F V++++L++S
Sbjct:  506 GTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISS 540          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 2.087e-16
Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEINC--LVYEYLENGSLEDYIYHQNGKPA-----LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            +V++L Q+ H ++V LLG C E+    LVYE++ NG+L ++IY   G        LP   R  I  + A GL +LH+S   PI HRD +   +  D +
Sbjct:  398 EVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDEN 495          

HSP 2 Score: 45.0542 bits (105), Expect = 2.087e-16
Identity = 19/38 (50.00%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T   GTL Y+DPEY+    +  KSD+Y+FGV++ +LLT
Sbjct:  518 TCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLT 555          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.684e-16
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEINC--LVYEYLENGSLEDYIY--HQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V+VL  +RH ++V LLG C   +C  L+YEY+ NGSL+D ++   +    A  W   +QI   VA G+ +LH+     IVHRD
Sbjct:  769 EVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRD 852          

HSP 2 Score: 41.2022 bits (95), Expect = 2.684e-16
Identity = 17/43 (39.53%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T+   +++AG+  Y+ PEY  T  +  KSD+Y++GVI+L+++T
Sbjct:  879 TDESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIIT 921          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 2.710e-16
Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++++++H ++V LLG C   E   L+YE+ +N SL+ YI+  N +  L W  R++II  VA GL +LH      IVHRD
Sbjct:  388 EVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRD 469          

HSP 2 Score: 41.5874 bits (96), Expect = 2.710e-16
Identity = 19/48 (39.58%), Postives = 33/48 (68.75%), Query Frame = 3
Query:  333 ETDNITEYRETI-LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            +TD  ++ R T  +AGT  YM PEY  +G    K+D+++FGV++L+++
Sbjct:  495 DTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEII 542          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.717e-16
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+L  I+H ++V L G C  P    L+Y+YL  GSL++ + H+ G+  L W  R  II   A GLA+LH+     I+HRD
Sbjct:  348 ELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEAL-HKRGEQ-LDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRD 427          

HSP 2 Score: 48.521 bits (114), Expect = 2.717e-16
Identity = 21/48 (43.75%), Postives = 33/48 (68.75%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLI 506
            TI+AGT  Y+ PEY ++G    K+D+Y+FGV++L++L+  LP     I
Sbjct:  461 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFI 508          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.744e-16
Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALP--WFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++  L Q+ HP++V L+G C   E   LVYE++  GSLE++++    K   P  W +R ++  + A GLAFLH S P  +++RD
Sbjct:  115 EINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLH-SDPVKVIYRD 197          

HSP 2 Score: 43.1282 bits (100), Expect = 2.744e-16
Identity = 19/40 (47.50%), Postives = 27/40 (67.50%), Query Frame = 3
Query:  354 YRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            Y  T + GT  Y  PEY  TG +  +SD+Y+FGV++L+LL
Sbjct:  229 YVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELL 268          
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
Y4391_ARATH1.227e-1640.24Probable receptor-like protein kinase At4g39110 OS... [more]
Y5613_ARATH1.228e-1640.23Probable receptor-like protein kinase At5g61350 OS... [more]
NORK_PEA2.070e-1638.30Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5169_ARATH2.073e-1637.80Probable LRR receptor-like serine/threonine-protei... [more]
Y1839_ARATH2.086e-1637.89Probable serine/threonine-protein kinase At1g18390... [more]
WAKLP_ARATH2.087e-1636.73Wall-associated receptor kinase-like 15 OS=Arabido... [more]
Y5148_ARATH2.684e-1640.48Probable leucine-rich repeat receptor-like protein... [more]
CRK41_ARATH2.710e-1640.24Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
FEI2_ARATH2.717e-1640.24LRR receptor-like serine/threonine-protein kinase ... [more]
Y3545_ARATH2.744e-1638.10Probable receptor-like protein kinase At3g55450 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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